New Frontiers in Schistosoma Genomics and Transcriptomics
Table 1
Availability of genomic and transcriptomic data for Schistosoma species.
Taxid
Taxon
ncDNA
mtDNA
ESTs
Barcoding
6184
Schistosoma bovis
No
No
No
Yes
6186
Schistosoma curassoni
No
No
No
Yes
230327
Schistosoma edwardiense
No
No
No
Yes
393876
Schistosoma guineensis
No
No
No
Yes
6185
Schistosoma haematobium
Yes
Yes
Yes
Yes
157462
Schistosoma hippopotami
No
No
No
Yes
198245
Schistosoma incognitum
No
No
No
Yes
216970
Schistosoma indicum
No
No
No
Yes
6187
Schistosoma intercalatum
No
No
No
Yes
6182
Schistosoma japonicum
Yes
Yes
Yes
Yes
646316
Schistosoma kisumuensis (*)
No
No
No
Yes
216972
Schistosoma leiperi
No
No
No
Yes
53353
Schistosoma malayensis
No
Yes
No
Yes
6183
Schistosoma mansoni
Yes
Yes
Yes
Yes
48269
Schistosoma margrebowiei
No
No
No
Yes
31246
Schistosoma mattheei
No
No
No
Yes
38744
Schistosoma mekongi
No
Yes
No
Yes
216971
Schistosoma nasale
No
No
No
Yes
6188
Schistosoma rodhaini
No
No
No
Yes
191505
Schistosoma sinensium
No
No
No
Yes
230328
Schistosoma sp. Uganda-JATM-2003
No
No
No
Yes
6189
Schistosoma spindale
No
Yes
No
Yes
Taxid: NCBI taxonomy identifier. ncDNA: nuclear DNA genome (SchistoDB.org). mtDNA: mitochondrial DNA genome (NCBI Organelle Genome Resources). ESTs: data from NCBI dbEST (release 120701, July 1, 2012). Barcoding: DNA barcoding used on cox1 sequences (BOLD Systems). *Schistosoma sp. BH-2009.
