|
| | miRNA | Predicted functions or targets |
|
|
Conserved miRNAs between poplar and Arabidopsis [25, 66] | ptr-miR156 | (i) SPB-like
(ii) Nitrate transporter |
| ptr-miR159 | (i) MYB
(ii) Asparagine synthase
(iii) (1-4)-b-mannan endohydrolase |
| ptr-miR160 | Auxin-responsive factor |
| ptr-miR162 | DCL1 |
| ptr-miR164 | (i) NAC-domain protein
(ii) Protein kinase |
| ptr-miR168 | (i) Vesicle coat protein complex COPI
(ii) AGO1 |
| ptr-miR171 | Scarecrow-like transcription factor |
| ptr-miR172 | Homeotic protein APETALA2 |
| ptr-miR319 | MYB |
| ptr-miR408 | (i) Plastocyanin-like
(ii) Early-responsive to dehydration-related protein |
| ptr-miR472 | Putative disease resistance protein |
|
| Poplar miRNAs [66] | ptr-miR473 | (i) UV-B-resistant protein (UVR8)
(ii) GRAS domain-containing protein |
| ptr-miR474 | (i) PPR
(ii) Protein kinase
(iii) Kinesin
(iv) Leucine-rich repeat |
| ptr-miR475 | PPR |
| ptr-miR476 | PPR |
| ptr-miR477 | (i) GRAS domain-containing protein
(ii) NAC-domain protein
(iii) Zinc finger protein |
| ptr-miR478 | Organic anion transporter |
| ptr-miR480 | Proton-dependent oligopeptide transport family protein |
| ptr-miR482 | Putative disease resistance protein |
|
|
P. taeda miRNAs [67] | pta-miR156 | (i) Peptidyl-tRNA hydrolase-like
(ii) SPB-domain protein |
| pta-miR159 | (i) MYB
(ii) Programmed cell death 6 protein-like |
| pta-miR160 | (i) Auxin-responsive factor 10 (ARF10)
(ii) Aux/IAA protein |
| pta-miR319 | Acyl-ACP thioesterase |
| pta-miR946 | Disease resistance protein |
| pta-miR947 | (i) Pepsin A
(ii) Microtubule-bundling polypeptide
(iii) Non-protein-coding genes |
| pta-miR948 | (i) Serine/threonine kinase
(ii) Pepsin A |
| pta-miR950 | (i) Non-protein-coding genes
(ii) AMP-binding protein |
| pta-miR951 | Non-protein-coding genes |
| pta-miR952 | (i) Multidrug resistance-associated protein
(ii) Thaumatin-like |
|
|
Conserved miRNAs found in Pinus densata [70] | pde-miR162 | (i) DCL1 (RNA processing)
(ii) Nodal modulator 1-like (carboxypeptidase activity) |
| pde-miR166 | Class III HD-Zip protein HDZ33 (DNA binding) |
| pde-miR171 | (i) GRAS family transcription factor (DNA binding)
(ii) Actin binding protein (actin binding) |
| pde-miR482 | Histone deacetylase (histone deacetylation) |
| pde-miR2118 | CC-NBS-LRR resistance-like protein (defence response) |
|
