A Topology Structure Based Outer Membrane Proteins Segment Alignment Method

Table 3

Comparison of the performance of fold recognition for OMPs with HHsearch.

Methods	Top 1		Top 2		Top 3
	Acc. (%)	TM-score	Acc. (%)	TM-score	Acc. (%)	TM-score
OMSA	57.1	0.621	66.7	0.576	76.7	0.491
HHsearch	46.4	0.553	60.0	0.512	66.7	0.407

Acc.: accuracy.