Research Article

Bioinformatic Identification of Peptidomimetic-Based Inhibitors against Plasmodium falciparum Antigen AMA1

Table 1

List of small drug-like molecules binding to the hydrophobic groove of PfAMA1 based on the structures of PfAMA1-binding peptidomimetics.

S. numberCompound (ZINC ID)Binding affinity (kcal/mol)Properties

1ZINC03830751Mol. Wt.: 352.478
: 4.36
Charge: 0
H-bond donor: 1
H-bond acceptor: 3

2ZINC03830752Mol. Wt.: 352.478
: 4.36
Charge: 0
H-bond donor: 1
H-bond acceptor: 3

3ZINC03831142Mol. Wt.: 498.576
: 2.85
Charge: 0
H-bond donor: 3
H-bond acceptor: 7

4ZINC00001003Mol. Wt.: 313.309
: 2.79
Charge: 0
H-bond donor: 1
H-bond acceptor: 3

5ZINC03775140Mol. Wt.: 465.953
: 3.36
Charge: 0
H-bond donor: 2
H-bond acceptor: 5

6ZINC03831143Mol. Wt.: 498.576
: 2.85
Charge: 0
H-bond donor: 3
H-bond acceptor: 7

7ZINC03831141Mol. Wt.: 498.576
: 2.85
Charge: 0
H-bond donor: 3
H-bond acceptor: 7

8ZINC00608261Mol. Wt.: 373.884
: 3.59
Charge: 0
H-bond donor: 2
H-bond acceptor: 3

9ZINC03813069Mol. Wt.: 379.501
: 2.89
Charge:
H-bond donor: 3
H-bond acceptor: 5

10ZINC00000128Mol. Wt.: 292.379
: 4.36
Charge: 0
H-bond donor: 3
H-bond acceptor: 4

11ZINC02001884Mol. Wt.: 379.501
: 2.89
Charge: 0
H-bond donor: 3
H-bond acceptor: 5