310948.fig.001a
(a)
310948.fig.001b
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310948.fig.001c
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Figure 1: Structure prediction and phylogenetic alignment analysis of the dairy goat PPARγ gene. (a) Phylogenetic tree showing the relatedness of PPARγ CDS sequences of mouse (Mus), human (Homo), bovine (Bos), sheep (Ovis), and goat (Capra). The alignment was performed with ClustalW. The digital “0.005” is the genetic ruler. (b) The tertiary structure prediction of goat PPARγ. Alpha helices are colored in crimson, beta sheets in yellow, turnings in blue, and irregular curl in white. (c) The ligand binding domain prediction of goat PPARγ. The amino acids involved in the binding sites are colored in blue. The ligands colored in laurel green. In grey is the predicted tertiary structure of the goat PPARγ protein.