Research Article

Conservation of Nucleosome Positions in Duplicated and Orthologous Gene Pairs

Table 4

Spearman's rank correlation coefficients between nucleosome position profiles in the promoters of 347 orthologous gene pairs between Aspergillus fumigatus and Saccharomyces cerevisiae.

S. cerevisiae geneA. fumigatus geneCorrelation coefficient

YCR053WAFUA_3G089800.851750303
YOL006CAFUA_1G035000.814728478
YLR208WAFUA_4G060900.810778356
YJR160CAFUA_8G072400.807607644
YKL064WAFUA_2G080700.771984405
YDL208WAFUA_1G135700.763687527
YDL247WAFUA_8G072400.751799318
YJL034WAFUA_2G046200.751475734
YJL174WAFUA_2G075900.731359519
YGL006WAFUA_1G108800.706118907
YLR307WAFUA_6G104300.701428537
YOR056CAFUA_5G040000.693624039
YJR049CAFUA_5G128700.6873278
YOR132WAFUA_5G071500.684358232
YDR028CAFUA_8G027200.681519128
YKL059CAFUA_2G062200.677236775
YDR019CAFUA_1G107800.673590566
YDR262WAFUA_8G053600.668577442
YJR160CAFUA_3G017000.655149877
YBL087CAFUA_2G033800.654275917
YDR120CAFUA_3G042000.653965099
YMR110CAFUA_4G135000.649573592
YDR479CAFUA_2G015100.649340576
YLR307WAFUA_4G099400.641152119
YLL050CAFUA_5G105700.636927762
YMR011WAFUA_2G115200.631877767
YGR149WAFUA_3G082400.627253467
YKL125WAFUA_1G025900.626251676
YDL247WAFUA_3G017000.621782331
YHR165CAFUA_2G030300.616638486
YLR355CAFUA_3G144900.615946987
YLR307WAFUA_3G072100.615345397
YNL156CAFUA_4G076800.605449075
YOL157CAFUA_8G070700.600254438
YPL196WAFUA_3G087400.596649007
YOL156WAFUA_2G115200.589475104
YGL055WAFUA_7G059200.583471232
YER094CAFUA_4G074200.580111415
YER026CAFUA_4G136800.579632053
YKR031CAFUA_3G056300.578947614
YJR041CAFUA_1G132000.577042969
YCL057C-AAFUA_1G131950.56703028
YKL167CAFUA_6G126200.566497151
YDR334WAFUA_7G023700.556810391
YDL085WAFUA_1G119600.555058025
YIR038CAFUA_8G025000.553657653
YGL056CAFUA_1G066600.550891198
YLR133WAFUA_1G159300.547961885
YLR137WAFUA_2G099300.542448721
YER095WAFUA_1G104100.540102076
YCR090CAFUA_2G155100.540015424
YIR022WAFUA_3G128400.539096148
YJR048WAFUA_2G131100.537701308
YDL247WAFUA_8G013400.536753536
YGL119WAFUA_6G043800.528264148
YDR054CAFUA_5G092000.520282879
YNR036CAFUA_5G107500.51817226
YJL050WAFUA_4G071600.517374235
YKR036CAFUA_5G131400.515007541
YML041CAFUA_2G050300.514819597
YML080WAFUA_1G165500.512494533
YJL093CAFUA_1G142500.5107227
YDR238CAFUA_1G109700.509749906
YJL197WAFUA_2G141300.501902821
YER173WAFUA_8G028200.501581347
YJR160CAFUA_8G013400.499250408
YOL058WAFUA_2G043100.497155736
YGR006WAFUA_1G169900.496383573
YPR161CAFUA_5G055100.495551014
YBR136WAFUA_4G047600.49434371
YJR049CAFUA_2G013500.493221085
YPR060CAFUA_5G131300.490832735
YDR055WAFUA_4G068200.482973721
YLR104WAFUA_5G040400.47610876
YIL129CAFUA_6G110100.473123981
YDR300CAFUA_2G075700.469287567
YOL156WAFUA_7G009500.46726022
YGL201CAFUA_5G108900.462753539
YKR086WAFUA_1G038200.461061937
YPL157WAFUA_6G086100.460257721
YIL046WAFUA_2G141100.45798838
YGL048CAFUA_4G046600.457664607
YHR216WAFUA_2G036100.456902272
YDR424CAFUA_1G048500.455530713
YPR141CAFUA_2G142800.452133975
YLR427WAFUA_1G071500.444534443
YHL004WAFUA_1G065700.439699159
YLL002WAFUA_5G095400.431520497
YKR052CAFUA_6G125500.429429023
YNL260CAFUA_1G090000.425937756
YNL112WAFUA_2G107500.423331447
YFL026WAFUA_3G143300.422540136
YCL038CAFUA_2G153700.420548714
YPR156CAFUA_4G011400.419838437
YHL024WAFUA_3G062300.417835282
YBR173CAFUA_5G107400.414366599
YGR178CAFUA_1G096300.410618083
YMR036CAFUA_6G082000.408252022
YDL147WAFUA_3G066100.40670988
YJR095WAFUA_2G169300.405617695
YPL171CAFUA_2G179600.40043227
YBL061CAFUA_8G056200.398124519
YHL001WAFUA_6G038300.397471165
YNL255CAFUA_1G076300.390527675
YGL006WAFUA_3G106900.389206341
YIL125WAFUA_4G116500.387564721
YMR011WAFUA_5G011600.381368332
YMR010WAFUA_5G035100.378223656
YMR319CAFUA_4G146400.376638524
YDL110CAFUA_1G091600.376540694
YOL086CAFUA_5G062400.376281416
YGR076CAFUA_4G090000.373900773
YOR204WAFUA_4G076600.368301524
YMR229CAFUA_2G160400.367246087
YLR025WAFUA_1G064200.363738278
YPL281CAFUA_6G067700.363265962
YOR294WAFUA_7G044300.363077313
YLR299WAFUA_7G047600.36169498
YCL038CAFUA_2G061700.359699115
YKL113CAFUA_3G060600.351986208
YHL020CAFUA_5G094200.350312962
YMR224CAFUA_6G114100.348946198
YDR444WAFUA_3G042400.345942811
YER107CAFUA_1G090200.34238252
YDR162CAFUA_2G036800.342381673
YNL212WAFUA_3G087500.341561675
YNL097CAFUA_3G119400.339603963
YKL191WAFUA_6G071000.337319743
YPL030WAFUA_6G025700.336821966
YNL224CAFUA_3G053300.336636223
YKR024CAFUA_5G110500.328747023
YPR020WAFUA_1G162800.323479927
YPL171CAFUA_2G040600.322952534
YOR393WAFUA_6G067700.321210691
YPR088CAFUA_5G038800.31284654
YGL058WAFUA_6G142100.312000165
YFL059WAFUA_5G080900.309971957
YBR243CAFUA_2G112400.307271969
YJL048CAFUA_3G063600.306215007
YNL055CAFUA_4G069100.305279025
YOR058CAFUA_2G162600.305221634
YGR240CAFUA_4G009600.304340045
YBR279WAFUA_2G110000.303224
YPL078CAFUA_8G054400.300712891
YLR059CAFUA_3G118200.296403753
YLR380WAFUA_6G126900.295562758
YDL174CAFUA_1G175200.29517154
YCL057WAFUA_7G059300.293762978
YDR234WAFUA_5G088900.293096856
YDR438WAFUA_5G121400.287954196
YGL028CAFUA_8G056100.287899385
YML004CAFUA_6G079400.285261452
YOL045WAFUA_2G028500.284622252
YLR429WAFUA_2G142700.283845667
YDR397CAFUA_3G023400.283499213
YBR260CAFUA_3G062800.282196097
YCR087C-AAFUA_7G047000.281322207
YMR011WAFUA_7G009500.280854319
YOL148CAFUA_1G165800.274850272
YDR379WAFUA_1G126800.273041289
YJL151CAFUA_5G105900.272979399
YML020WAFUA_5G120900.266526854
YGR082WAFUA_6G113800.265129767
YJR113CAFUA_1G042800.262789584
YIL031WAFUA_5G032000.256820972
YDR432WAFUA_3G101000.255963453
YDR359CAFUA_4G075600.255317292
YDR233CAFUA_6G136700.253861938
YGR255CAFUA_4G129300.252312468
YFR009WAFUA_4G060700.245534257
YPL280WAFUA_3G084900.243781447
YOR075WAFUA_2G096700.239487119
YJL219WAFUA_7G009500.239124986
YCR026CAFUA_2G147700.234276623
YOR391CAFUA_3G084900.233098887
YGL180WAFUA_4G090500.231299038
YLR323CAFUA_5G077200.231114462
YGL006WAFUA_7G010300.222088168
YBR179CAFUA_5G133920.219453048
YKR082WAFUA_4G058400.214144582
YLR087CAFUA_2G135200.209434557
YCL064CAFUA_4G078100.204494803
YOL156WAFUA_5G011600.203744073
YBR249CAFUA_7G040700.202306902
YJL093CAFUA_3G075400.201465401
YOL077CAFUA_1G022100.196710807
YLR426WAFUA_1G062800.196041865
YMR060CAFUA_2G038400.194299595
YOR048CAFUA_1G137300.193994391
YDL174CAFUA_7G025600.193117882
YJL221CAFUA_8G070700.187015236
YGR054WAFUA_3G059700.181434929
YPR176CAFUA_7G044600.180215936
YML003WAFUA_1G098700.173517378
YKR084CAFUA_2G046300.171646807
YDR270WAFUA_4G126200.171601357
YOR336WAFUA_2G023600.164107564
YFL058WAFUA_5G024700.160695353
YNL301CAFUA_2G073800.151927636
YJL221CAFUA_7G063800.150927464
YGR280CAFUA_7G036900.150422383
YOL089CAFUA_6G019600.149731857
YGR193CAFUA_3G082700.14875632
YDR328CAFUA_5G060600.143711765
YPL254WAFUA_2G060600.143220591
YPL206CAFUA_2G009900.138505935
YEL021WAFUA_2G083600.13720587
YOL068CAFUA_4G121200.134069861
YJR160CAFUA_7G063900.131179873
YNL310CAFUA_6G082300.130305791
YIL061CAFUA_5G134800.126828721
YGL163CAFUA_6G129100.12597657
YGR173WAFUA_5G067700.123606414
YJL092WAFUA_2G039100.122708164
YJR065CAFUA_5G115600.121854722
YBR023CAFUA_8G056300.120791924
YBR084WAFUA_3G086500.118154138
YMR197CAFUA_4G107100.114428905
YMR241WAFUA_5G042200.114113659
YNL097CAFUA_7G018700.109316946
YGL171WAFUA_1G162900.103112508
YOR365CAFUA_4G133400.094260129
YHR215WAFUA_6G113300.092128581
YKL013CAFUA_6G023700.088958318
YOR043WAFUA_4G061300.087990985
YPR062WAFUA_1G050500.087018417
YDR497CAFUA_2G079100.078863767
YDR477WAFUA_2G017000.074801159
YLR378CAFUA_5G081300.074624328
YBR060CAFUA_5G081100.073589072
YGL120CAFUA_5G116200.069009268
YIL063CAFUA_2G108100.06328373
YOL157CAFUA_7G063800.06047767
YGL043WAFUA_3G076700.059398891
YMR027WAFUA_5G067100.058232831
YHR215WAFUA_8G019100.05787337
YDL247WAFUA_7G051900.05184022
YPR048WAFUA_5G072900.049809159
YBL051CAFUA_5G019400.048514144
YHR148WAFUA_2G083200.047441878
YJR160CAFUA_7G051900.045923723
YJL039CAFUA_5G126700.042943521
YNL029CAFUA_5G121600.031203315
YGR267CAFUA_5G031400.029526621
YNL027WAFUA_1G069000.02747405
YDL247WAFUA_7G063900.023887472
YHR107CAFUA_5G030800.020068991
YKL165CAFUA_4G039700.01938034
YNR012WAFUA_2G054300.019075112
YLR085CAFUA_4G044200.018617278
YPL082CAFUA_1G058300.017285628
YCL064CAFUA_1G061500.014476469
YNR039CAFUA_1G120900.011820922
YOR216CAFUA_1G088300.008439713
YOR148CAFUA_4G075500.006702846
YDR420WAFUA_4G005000.006566287
YPR018WAFUA_5G03720−0.000683184
YDR322WAFUA_5G12810−0.002517201
YNR015WAFUA_3G08390−0.013154917
YBR251WAFUA_5G11540−0.01637247
YHL028WAFUA_5G09020−0.020657813
YPL146CAFUA_2G05550−0.023787247
YKL127WAFUA_3G11830−0.026619404
YJR160CAFUA_2G10910−0.029508087
YIR038CAFUA_1G17010−0.030714781
YDL247WAFUA_2G10910−0.033905332
YBR204CAFUA_1G03540−0.038361835
YJR010WAFUA_3G06530−0.038908707
YMR210WAFUA_6G04640−0.046477426
YPR187WAFUA_1G05160−0.048502572
YDR037WAFUA_6G07640−0.052027721
YIL134WAFUA_6G05170−0.053118026
YLR286CAFUA_5G03760−0.062116003
YKL179CAFUA_1G14240−0.062203351
YDR109CAFUA_4G04680−0.063717983
YOL157CAFUA_3G07380−0.064624439
YIR038CAFUA_2G17300−0.068756542
YDL102WAFUA_2G16600−0.088010728
YOR389WAFUA_2G01940−0.09375584
YBR244WAFUA_3G12270−0.097477745
YJL219WAFUA_2G11520−0.098366126
YPL126WAFUA_7G02610−0.101632712
YDL189WAFUA_1G09400−0.104331651
YHL016CAFUA_1G04870−0.106608293
YLR380WAFUA_4G13930−0.111437921
YPR165WAFUA_6G06900−0.117573203
YOL062CAFUA_5G07930−0.122120003
YGL248WAFUA_1G14890−0.124318908
YLR029CAFUA_1G04660−0.129375946
YMR214WAFUA_2G08300−0.130867913
YOR124CAFUA_6G12270−0.136050424
YOL023WAFUA_1G06520−0.136914472
YPL280WAFUA_3G01210−0.13706189
YLR380WAFUA_7G06760−0.141209958
YNL241CAFUA_3G08470−0.153108798
YOR391CAFUA_3G01210−0.154014157
YOL089CAFUA_6G02330−0.161608796
YGL215WAFUA_3G10040−0.170171082
YMR137CAFUA_2G15220−0.174259735
YER004WAFUA_6G08930−0.179730339
YDR365CAFUA_2G05420−0.181946191
YDR529CAFUA_4G06790−0.185927497
YDR062WAFUA_6G00300−0.189190157
YOL086CAFUA_7G01010−0.190813468
YOL026CAFUA_5G03630−0.19138562
YIL033CAFUA_3G10000−0.195925157
YBR290WAFUA_4G13740−0.19955841
YAR019CAFUA_4G06750−0.204744755
YHL007CAFUA_2G04680−0.20737573
YMR078CAFUA_7G05480−0.222707833
YDR311WAFUA_4G11690−0.22686955
YOL100WAFUA_3G12670−0.230714484
YGR162WAFUA_2G09490−0.232235851
YGL255WAFUA_1G01550−0.248116851
YPL038WAFUA_6G01910−0.252388553
YCL035CAFUA_1G06100−0.255759517
YNL082WAFUA_2G13410−0.259394819
YDR062WAFUA_1G11890−0.263523207
YOR390WAFUA_2G16210−0.269616243
YJR141WAFUA_3G07970−0.2738444
YOR365CAFUA_2G17650−0.274036262
YDL116WAFUA_1G10860−0.278315121
YKL020CAFUA_1G12550−0.278379939
YDL174CAFUA_3G06820−0.286419799
YBR029CAFUA_1G07010−0.296926336
YLR096WAFUA_1G11080−0.297540349
YFL028CAFUA_6G05080−0.303502181
YOR089CAFUA_3G10740−0.30892361
YPR010CAFUA_2G13000−0.309890067
YJL219WAFUA_5G01160−0.321415181
YNL097CAFUA_4G11660−0.329160424
YMR116CAFUA_4G13170−0.329415498
YPL280WAFUA_5G01430−0.331554435
YHR091CAFUA_2G14030−0.337931682
YIL030CAFUA_2G08650−0.350942099
YFR037CAFUA_7G05510−0.356342064
YOR391CAFUA_5G01430−0.356843862
YDL174CAFUA_1G00510−0.402217656
YML121WAFUA_5G09650−0.410825283
YFL060CAFUA_2G08580−0.411505108
YDR301WAFUA_8G04040−0.413112754
YJL221CAFUA_3G07380−0.413321446
YLR326WAFUA_5G12410−0.458648708
YBL108C-AAFUA_4G03360−0.487139446
YGR165WAFUA_5G08380−0.519339895
YKL157WAFUA_4G09030−0.604021491
YNL334CAFUA_2G08580−0.720610634