About this Journal Submit a Manuscript Table of Contents
The Scientific World Journal
Volume 2012 (2012), Article ID 416291, 9 pages
http://dx.doi.org/10.1100/2012/416291
Research Article

Genetic Diversity of Upland Rice Germplasm in Malaysia Based on Quantitative Traits

1Institute of Tropical Agriculture, Universiti Putra Malaysia, 43400 Serdang, Selangor, Malaysia
2Department of Crop Science, Faculty of Agriculture, Universiti Putra Malaysia, 43400 Serdang, Selangor, Malaysia
3Bangladesh Rice Research Institute (BRRI), Gazipur 1701, Bangladesh

Received 12 December 2011; Accepted 18 January 2012

Academic Editors: V. C. Concibido and Y. Yu

Copyright © 2012 M. Sohrabi et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Linked References

  1. A. K. Tyagi, J. P. Khurana, P. Khurana et al., “Structural and functional analysis of rice genome,” Journal of Genetics, vol. 83, no. 1, pp. 79–99, 2004. View at Scopus
  2. E. P. Guimarães, “Rice breeding,” in Cereals, M. J. Carena, Ed., pp. 1–28, Springer, New York, NY, USA, 2009.
  3. M. Kondo, P. P. Pablico, D. V. Aragones et al., “Genotypic and environmental variations in root morphology in rice genotypes under upland field conditions,” Plant and Soil, vol. 255, no. 1, pp. 189–200, 2003. View at Publisher · View at Google Scholar · View at Scopus
  4. N. D. Thanh, H. G. Zheng, N. V. Dong, L. N. Trinh, M. L. Ali, and H. T. Nguyen, “Genetic variation in root morphology and microsatellite DNA loci in upland rice (Oryza sativa L.) from Vietnam,” Euphytica, vol. 105, no. 1, pp. 43–51, 1999. View at Publisher · View at Google Scholar · View at Scopus
  5. E. Reuveni, “The genetic background effect on domesticated species: a mouse evolutionary perspective,” TheScientificWorldJournal, vol. 11, pp. 429–436, 2011. View at Publisher · View at Google Scholar
  6. M. H. Musa, H. Azemi, A. S. Juraimi, and T. M. Mohamed, “Upland rice varieties in Malaysia: agronomic and soil physico-chemical characteristics,” Pertanika Journal of Tropical Agricultural Science, vol. 32, no. 2, pp. 225–246, 2009.
  7. A. Melchinger, M. Messmer, M. Lee, W. Woodman, and K. Lamkey, “Diversity and relationships among US maize inbreds revealed by restriction fragment length polymorphisms,” Crop Science, vol. 31, no. 3, pp. 669–678, 1991.
  8. R. K. Varshney, T. Thiel, T. Sretenovic-Rajicic et al., “Identification and validation of a core set of informative genic SSR and SNP markers for assaying functional diversity in barley,” Molecular Breeding, vol. 22, no. 1, pp. 1–13, 2008. View at Publisher · View at Google Scholar · View at Scopus
  9. T. Sasaki, “The map-based sequence of the rice genome,” Nature, vol. 436, no. 7052, pp. 793–800, 2005. View at Publisher · View at Google Scholar · View at Scopus
  10. S. R. McCouch, G. Kochert, Z. H. Yu et al., “Molecular mapping of rice chromosomes,” Theoretical and Applied Genetics, vol. 76, no. 6, pp. 815–829, 1988. View at Publisher · View at Google Scholar · View at Scopus
  11. Z. Y. Wang, G. Second, and S. D. Tanksley, “Polymorphism and phylogenetic relationships among species in the genus Oryza as determined by analysis of nuclear RFLPs,” Theoretical and Applied Genetics, vol. 83, no. 5, pp. 565–581, 1995. View at Publisher · View at Google Scholar · View at Scopus
  12. M. A. Latif, M. M. Rahman, M. S. Kabir, M. A. Ali, M. T. Islam, and M. Y. Rafii, “Genetic diversity analyzed by quantitative traits among rice (Oryza sativa L.) genotypes resistant to blast disease,” African Journal of Microbiology Research, vol. 5, no. 25, pp. 4383–4391, 2011. View at Publisher · View at Google Scholar
  13. L. S. Kumar, “DNA markers in plant improvement: an overview,” Biotechnology Advances, vol. 17, no. 2-3, pp. 143–182, 1999. View at Publisher · View at Google Scholar · View at Scopus
  14. R. Din, M. Y. Khan, M. Akmal et al., “Linkage of morphological markers in Brassica,” Pakistan Journal of Botany, vol. 42, no. 5, pp. 2995–3000, 2010. View at Scopus
  15. G. W. Burton, “Quantitative inheritance in grasses,” in Proceedings of the International Grassland Congress, vol. 1, pp. 277–283, 1952.
  16. G. W. Burton and E. De Vane, “Estimating heritability in tall fescue (Festuca arundinacea) from replicated clonal material,” Agronomy Journal, vol. 45, no. 10, pp. 478–481, 1953.
  17. H. W. Johnson, H. Robinson, and R. Comstock, “Estimates of genetic and environmental variability in soybeans,” Agronomy Journal, vol. 47, pp. 314–318, 1955.
  18. P. Pandey, P. John Anurag, D. K. Tiwari, S. K. Yadav, and B. Kumar, “Genetic variability, diversity and association of quantitative traits with grain yield in rice (Oryza sativa L.),” Journal of Bio-Science, vol. 17, no. 1, pp. 77–82, 2009.
  19. J. L. Wang, Y. B. Gao, N. X. Zhao et al., “Morphological and RAPD analysis of the dominant species Stipa krylovii Roshev. in Inner Mongolia steppe,” Botanical Studies, vol. 47, no. 1, pp. 23–35, 2006. View at Scopus
  20. R. Caldo, L. Sebastian, and J. Hernandez, “Morphology-based genetic diversity analysis of ancestral lines of Philippine rice cultivars,” Philippine Journal of Crop Science, vol. 21, no. 3, pp. 86–92, 1996.
  21. R. Chandra, S. Pradhan, S. Singh, L. Bose, and O. Singh, “Multivariate analysis in upland rice genotypes,” World Journal of Agricultural Sciences, vol. 3, no. 3, pp. 295–300, 2007.
  22. M. Abarshahr, B. Rabiei, and H. S. Lahigi, “Assessing genetic diversity of rice varieties under drought stress conditions,” Notulae Scientia Biologicae, vol. 3, no. 1, pp. 114–123, 2011.
  23. A. Ahmadikhah, S. Nasrollanejad, and O. Alishah, “Quantitative studies for investigating variation and its effect on heterosis of rice,” International Journal of Plant Production, vol. 2, no. 4, pp. 297–308, 2008.
  24. F. C. Lasalita-Zapico, J. A. Namocatcat, and J. L. Cariño-Turner, “Genetic diversity analysis of traditional upland rice cultivars in Kihan, Malapatan, Sarangani Province, Philippines using morphometric markers,” Philippine Journal of Science, vol. 139, no. 2, pp. 177–180, 2010.
  25. N. Zafar, S. Aziz, and S. Masood , “Phenotypic divergence for agro-morphological traits among landrace genotypes of rice (Oryza sativa L.) from Pakistan,” International Journal of Biological Sciences, vol. 6, no. 2, pp. 335–339, 2006.
  26. S. Sedeek, S. Hammoud, M. Ammar, and T. Metwally, “Genetic variability, heritability, genetic advance and cluster analysis for for some physiological traits and grain yield nad its components in rice (Oryza sativa L.),” Journal of Agricultural Sciences, vol. 35, no. 3, pp. 858–878, 2009.
  27. L. Laxuman, P. Salimath, H. Shashidhar, et al., “Analysis of genetics variability in interspecific backcross inbred lines in rice (Oryza sativa L.),” Karnataka Journal of Agricultural Sciences, vol. 23, no. 4, pp. 563–565, 2010.
  28. E. A. Veasey, E. F. Da Silva, E. A. Schammass, G. C. X. Oliveira, and A. Ando, “Morphoagronomic genetic diversity in American wild rice species,” Brazilian Archives of Biology and Technology, vol. 51, no. 1, pp. 95–104, 2008. View at Scopus
  29. M. A. Latif, M. Rafii Yusop, M. Motiur Rahman, and M. R. Bashar Talukdar, “Microsatellite and minisatellite markers based DNA fingerprinting and genetic diversity of blast and ufra resistant genotypes,” Comptes Rendus Biologies, vol. 334, no. 4, pp. 282–289, 2011. View at Publisher · View at Google Scholar
  30. M. A. Latif, M. M. Rahman, M. S. Kabir, M. A. Ali, M. T. Islam, and M. Y. Rafii, “Genetic diversity analyzed by quantitative traits among rice (Oryza sativa L.) genotypes resistant to blast disease,” African Journal of Microbiology Research, vol. 5, no. 25, pp. 4383–4391, 2011. View at Publisher · View at Google Scholar
  31. N. Abdullah, M. Rafii Yusop, M. Ithnin, G. Saleh, and M. A. Latif, “Genetic variability of oil palm parental genotypes and performance of its' progenies as revealed by molecular markers and quantitative traits,” Comptes Rendus Biologies, vol. 334, no. 4, pp. 290–299, 2011. View at Publisher · View at Google Scholar
  32. S. Rajiv, P. Thivendran, and S. Deivanai, “Genetic divergence of rice on some morphological and physichemical responces to drought stress,” Pertinaka Journal, vol. 32, no. 2, pp. 315–328, 2010.