Research Article

Hierarchical Modular Structure Identification with Its Applications in Gene Coexpression Networks

Table 1

GO enrichment analysis results of the gene modules on the lowest level.

Module Color, shape -sizeEnriched GO category value -sizeOverlap

White, square190Cellular carbohydrate metabolic process 6035
White, circle126Translation 10180
Grey, triangle135Organic acid biosynthetic process 8964
Grey, pentagon 62Cellular respiration 3628
Black, circle12Amino acid catabolic process to alcohol via Ehrlich pathway 54
Black, circle13Steroid biosynthetic process 139
White, pentagon19Branched chain family amino acid metabolic process 116
Grey, triangle209Ribonucleoprotein complex biogenesis 149106
Grey, square11Protein targeting to membrane 43
White, square11Regulation of translational termination 22