|
| Subtype | Probe | Sequence |
|
| hemagglutinin |
| 1 | H1-1 | gaagggagaatgaactattactggacactagtagagccgggagacaa |
| H1-2 | gtctccctgggggcaatcagyttctggatgtgytcyaatggg |
| H1-3 | acaggactaaggaacatcccatccattcaatccagaggtttgtttgg |
|
| 2 | H2-1 | taaggaatgttccccagattgaatcaagaggattgtttggggcaat |
| H2-2 | gtcaccgtgactcatgccaaggacattcttgagaaaacgcataatgg |
| H2-3 | tatgctacagtagcaggytccctgtcactggcaatcatgata |
| H2-4 | tgggatgtcataaattttgagagcactggtaatttaattgcaccagaata |
|
| 3 | H3-1 | atgtgggcctgccararaggcaacattaggtgcaacatttgc |
| H3-2 | atgtgggcttgccaaaaaggcaacatcagatgcaacatttgc |
| H3-3 | cagcaactgttacccttatgatgtgccggattatgyctccct |
|
| 4 | H4-1 | gcactrcttttagcctttattttgtgggcttgtcagaatggaaacat |
| H4-2 | attttgtgggcttgtcagaayggaaacatccggtgccagatttg |
| H4-3 | ttccatatcatgcttyttgctcgttgcactrcttttagcctt |
|
| 5 | H5-1 | ttgggacatcaacactaaaccagagattggtaccaaraatagctactaga |
| H5-2 | ttattcaacagtggcragttccctagcactggcaatcatggt |
| H5-3 | cccaacaataaagagragytacaataataccaaccaagaagatcttttgg |
| H5-4 | cccaacaataaagaggacctayaacaacaccaatgtagaagaccttttaa |
| H5-5 | tttatagagggaggatggcagggaatggtagatggttggtatgg |
| H5-6 | ctagatgtctggacttataatgctgaacttctggttctcatggaaaatga |
|
| 6 | H6-1 | cttggtgtgtatcaaattcttgcyatttatagtacggtatcgagcag |
| H6-2 | caaatccttgcyatttatagtacggtatcgagcagtctrgttttgg |
| H6-3 | gcaatgggtctttggatgtgttcaaatggttcaatgcartgca |
|
| 7 | H7-1 | atgggattggttttcatttgcataaagaatggaaacatgcrgtgcactat |
| H7-2 | cttcggggcatcatgtttcatacttctggccattgcaatggg |
| H7-3 | catcaaaatgcacaaggagarggaactgcagctgactacaaa |
| H7-4 | tggtttagcttcggggcatcatgcttcctwcttcttgccattgcaatggg |
|
| 8 | H8 | atttacagtacagtggcggccagtctytgcttggcaatcctg |
|
| 9 | H9-1 | cttacaaaatcctyaccatttattcgactgtcgcctcatctcttgt |
| H9-2 | gcaatggggtttgctgccttcytrttctgggccatgtccaat |
| H9-3 | ttctgggccatgtcyaatggatcttgcagatgcaacatttgtat |
|
| 10 | H10-1 | cttttggctgtcatcatggggcttgttttcttctgtytgaaaaatggaaa |
| H10-2 | gtcatcaattggacyaaggattcaataaccgacatctggacttatcarg |
|
| 11 | H11-1 | gatctccatgattctaatgttcgaaacctccatgaaaaggtcagacgaat |
| H11-2 | tgggcgtgcagyaatggatcatgtagatgtaccatttgcatt |
|
| 12 | H12 | tactgctcatgattattgggggtttcattttcggrtgtcaaaatggaaat |
|
| 13 | H13-1 | agtgttgtgytagtaggactcatactctctttcatcatgtgggcc |
| H13-2 | ataaatatgcttgcagacagaatagatgaygctgtaactgatgta |
|
| 14 | H14 | tgcatcacccatcaagcgataatgagcaaacggatctctacaagg |
|
| 15 | H15 | gctgatctgataatagaaagaagaaattcaagtgacatctgttacccagg |
|
| 16 | H16-1 | taatgccattgatgaaggagatggttgcttcaatcttcttcacaa |
| H16-2 | attcgaaatgggacatataatcatgaggactacaaagaagagtcacaa |
|
| Neuraminidase |
| 1 | N1-1 | gggttggtcttggccagacggtgctgagttgccattyaccatt |
| N1-2 | tcctaatggatggacarataccgacagtgatttctcagtgaaacaggatg |
| N1-3 | tggtcttggccagacggtgctgagttgccvttcaccattgac |
| N1-4 | caagagtctgaatgtgcatgtgtaaatggytcttgctttactgtaatgac |
|
| 2 | N2-1 | caagtgtgyatagcatggtccagctcaagttgtcacgatggaaa |
| N2-2 | tttggsraccaaacaagtgtgcatagcatggtccagctcaag |
| N2-3 | ttttgtggcacttcaggyachtatggaacaggctcatggcct |
| N2-4 | tgtgghacytcaggtacatatggaacaggctcatggcctgat |
|
| 3 | N3 | agyaatagtatagttactttctgtggaytagacaatgaacctggatcggg |
|
| 4 | N4 | tgtggtgttaattctgataccacaggttggtcatggccygatggc |
|
| 5 | N5 | ttttgtggtgtttcmagtgaggtcccaggrtggtcctgggatgatgg |
|
| 6 | N6-1 | tcatgccatgacggcatctcaagaatgtcratctgcatgtca |
| N6-2 | gagcgattrggatcatggtcctggcatgatggtgctgaratc |
| N6-3 | gagcgattgggatcktggtcatggcatgatggggctgaaatc |
|
| 7 | N7-1 | gttgaaggatgggtagtggtggcyaaggacaatgccataagatt |
| N7-2 | cagttgggtccggttccttccccgatggggcacaratccaat |
|
| 8 | N8-1 | atatggacctcwagyagctccattgtgatgtgtggagtagaycat |
| N8-2 | tgagtgtagaaatagggcaatcacccaatgtgtaccaggcaaggt |
| N8-3 | tggtcrtggcacgatggagctattcttccytttgacatcgat |
|
| 9 | N9 | atgtgttccagyacagaattcctkggacaatggaactggcctgat |
|
| M2-protein |
| | M2-1 | gcagartgctgtggatgttgacgatrgtcattttgtcaacatag |
| | M2-2 | cctatcagaaacgaatgggggtgcagatgcaacgattcaagtga |
| | M2-3 | ccttctacggaaggagtrccwgagtctatgagggaagaatatcg |
|
| NP protein |
| | NP-1 | acgaaaaggcaacgaacccgatcgtgccttcctttgacatga |
| | NP-2 | atgagtaatgaaggdtcttatttcttcggagacaatgcagargag |
|
