Genetic Diversity of Echinococcus granulosus in Southwest China Determined by the Mitochondrial NADH Dehydrogenase Subunit 2 Gene

Table 3

Multiple alignments of the 19 mtDNA haplotypes found in this study. Haplotype identification (Hp), GenBank accession number, number of isolates (𝑛), percentage (%), and nucleotide positions (Np) of point mutations are reported.

Haplotypes

h1

h2

h3

h4

h5

h6

h7

h8

h9

h10

h11

h12

h13

h14

h15

h16

h17

h18

h19

𝑛

6

14

2

5

3

3

3

1

1

1

1

1

1

2

1

1

1

2

2

%

11.8

27.5

3.9

9.8

5.9

5.9

5.9

2.0

2.0

2.0

2.0

2.0

2.0

3.9

2.0

2.0

2.0

3.9

3.9

NP

80^b

C^1

90^c

G^1

152^b

T^2

153^c

G^2

155^b

T^2

156^c

C^1

157^a

T^1

159^c

G^2

162^c

T^2

164^b

T^2

167^a

T^2

227^b

C^1

262^a

C^1

309^c

G^1

339^c

G^1

357^c

C^1

362^b

C^1

C^1

385^a

414^c

A^2

434^b

C^1

457^a

A^1

460^a

G^1

470^b

A^1

471^c

T^1

T^1

T^1

475^a

C^1

487^a

G^2

C^1

546^c

A^1

552^a

C^1

578^b

G^1

601^a

C^1

613^a

G^2

618^c

A^1

621^c

A^1

A^1

625^a

G^1

653^b

G^1

700^b

C^1

715^a

C^1

794^b

G^2

801^c

C^1

808^a

C^1

809^b

T^1

812^b

G^1

813^c

A^1

822^c

C^1

823^a

G^2

834^c

A^1

836^b

T^2

837^c

G^2

840^c

G^2

842^b

G^1

843^c

A^2

aFirst codon position.
^bSecond codon position.
^cThird codon position.
¹Transition mutation.
²Transversion mutation.