Research Article

Database Constraints Applied to Metabolic Pathway Reconstruction Tools

Table 1

Main differences between Biblio-MetReS (B), iHOP (i), String (S), and Laitor (L).

B i S L

Multiplatform X X X
Gene correlation in sentences X X X
Gene correlation in paragraphs X
Preprocessing X X X
Statistical method: value X
Statistical method: cooccurrence X X X X
List of synonyms X X X X
Interaction extraction between genes X X X
Semantic interaction understanding X X
Graphical representation X X X