Research Article

Database Constraints Applied to Metabolic Pathway Reconstruction Tools

Table 2

Generic organism table description.

Field Type Null Key Default

XXX_isoform_idchar(20)NOPRI
XXX_protein_idchar(20)YESNULL
XXX_gene_idchar(20)YESNULL
XXX_org_idchar(20)YESNULL
XXX_kegg_idchar(30)YESNULL
isoform_noint(5)YESMULNULL
XXX_gene_symbolvarchar(50)YESNULL
XXX_prot_namevarchar(500)YESNULL
XXX_prot_synonymvarchar(500)YESNULL
ncbi_ref_idchar(25)YESNULL
gi_numberchar(25)YESNULL
orf_startint(5)YESNULL
orf_endint(5)YESNULL
isoform_sequenceblobYESNULL
isoform_lengthint(5)YESNULL
isoform_mol_wtint(8)YESNULL
commentschar(200)YESNULL
statuschar(50)YESNULL