Transition and Transversion on the Common Trinucleotide Circular Code

Number <svg height="18.7125" id="M259" style="vertical-align:-3.98134pt" version="1.1" viewbox="0 0 74.224998 18.7125" width="74.224998" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
<g transform="matrix(.017,-0,0,-.017,43.975,13.963)"><path d="M332 -241l-20 -25q-120 87 -179 226.5t-59 310.5v1q0 170 59 308.5t179 227.5l20 -25q-86 -76 -134.5 -213.5t-48.5 -298.5q0 -160 48.5 -297.5t134.5 -214.5z" id="xF6021"></path></g><g transform="matrix(.017,-0,0,-.017,.062,13.688)"><path d="M457 488l-30 -3q-17 148 -131 148q-53 0 -84.5 -34.5t-31.5 -82.5q0 -42 25.5 -72t74.5 -62l33 -22q63 -42 95 -85t32 -102q0 -84 -67 -137t-163 -53q-58 0 -113 22t-70 43l-4 152l27 4q4 -32 15 -62.5t31 -59.5t53.5 -47t76.5 -18q56 0 92 35t36 96q0 39 -25 70t-78 68
l-31 22q-32 23 -53.5 41.5t-45 57t-23.5 77.5q0 82 58 132.5t156 50.5q46 0 101 -17l18.5 -6t17 -6t8.5 -3q-4 -55 0 -147z" id="x1D446"></path></g><g transform="matrix(.017,-0,0,-.017,8.222,13.688)"><path d="M300 -147l-18 -23q-106 71 -159 185.5t-53 254.5v1q0 139 53 252.5t159 186.5l18 -24q-74 -62 -115.5 -173.5t-41.5 -242.5q0 -130 41.5 -242.5t115.5 -174.5z" id="x28"></path></g><g transform="matrix(.017,-0,0,-.017,14.103,13.688)"><path d="M238 681l-124 -585q-7 -31 4 -31q10 0 37.5 18.5t49.5 41.5l16 -22q-40 -48 -89.5 -81.5t-76.5 -33.5q-42 0 -16 122l105 488q7 32 0 41t-39 9h-35l5 26q35 3 71 13t58 17.5t26 7.5q14 0 8 -31z" id="x1D459"></path></g><g transform="matrix(.017,-0,0,-.017,18.676,13.688)"><path d="M275 270q0 -296 -211 -440l-19 23q75 62 116.5 174t41.5 243t-42 243t-116 173l19 24q211 -144 211 -440z" id="x29"></path></g><g transform="matrix(.017,-0,0,-.017,29.266,13.688)"><path d="M535 323h-483v50h483v-50zM535 138h-483v50h483v-50z" id="x3D"></path></g>
<g transform="matrix(.012,-0,0,-.012,57.462,18.5)"><path d="M238 681l-124 -585q-7 -31 4 -31q10 0 37.5 18.5t49.5 41.5l16 -22q-40 -48 -89.5 -81.5t-76.5 -33.5q-42 0 -16 122l105 488q7 32 0 41t-39 9h-35l5 26q35 3 71 13t58 17.5t26 7.5q14 0 8 -31z" id="x1D459"></path></g><g transform="matrix(.012,-0,0,-.012,53.362,7.613)"><path d="M412 140l28 -9q0 -2 -35 -131h-373v23q112 112 161 170q59 70 92 127t33 115q0 63 -31 98t-86 35q-75 0 -137 -93l-22 20l57 81q55 59 135 59q69 0 118.5 -46.5t49.5 -122.5q0 -62 -29.5 -114t-102.5 -130l-141 -149h186q42 0 58.5 10.5t38.5 56.5z" id="x32"></path></g><g transform="matrix(.012,-0,0,-.012,59.074,7.613)"><path d="M241 635q53 0 94 -28.5t63.5 -76t33.5 -102.5t11 -116q0 -58 -11 -112.5t-34 -103.5t-63.5 -78.5t-94.5 -29.5t-95 28t-64.5 75t-34.5 102.5t-11 118.5q0 58 11.5 112.5t34.5 103t64.5 78t95.5 29.5zM238 602q-32 0 -55.5 -25t-35.5 -68t-17.5 -91t-5.5 -105
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<g transform="matrix(.017,-0,0,-.017,67.613,13.963)"><path d="M311 271q0 -171 -59 -310.5t-179 -226.5l-20 25q86 77 134.5 214.5t48.5 297.5q0 161 -48.5 298.5t-134.5 213.5l20 25q120 -89 179 -227.5t59 -308.5v-1z" id="xF6031"></path></g>
</svg> of trinucleotide codes after an evolution genetic map (transition <svg height="15.1125" id="M260" style="vertical-align:-2.3205pt" version="1.1" viewbox="0 0 31.9625 15.1125" width="31.9625" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
<g transform="matrix(.017,-0,0,-.017,.062,12.162)"><path d="M896 675l11 -18q-88 -73 -176 -73q-59 0 -181 28q-127 29 -168 29q-92 0 -153 -48q-60 -47 -60 -113q0 -55 33.5 -88t83.5 -33q70 0 116 45.5t74 136.5h20q-20 -102 -76.5 -157t-140.5 -55q-65 0 -108 39q-43 40 -43 105q0 97 87 155q89 59 224 59q57 0 175 -27
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</svg>, transversion I <svg height="16.3125" id="M261" style="vertical-align:-3.27605pt" version="1.1" viewbox="0 0 36.987499 16.3125" width="36.987499" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
<g transform="matrix(.017,-0,0,-.017,.062,12.162)"><path d="M214 21l2 -2q107 22 200 124q51 54 91 109t100 145l82 122q33 46 66 86q66 82 117 82q21 0 35.5 -13t14.5 -34q0 -18 -12.5 -30.5t-30.5 -12.5q-20 0 -32 13t-12 36h-1q-51 -29 -200 -261q-146 -229 -249 -308q-118 -92 -204 -92q-14 0 -47 6q41 38 68 89q26 47 79 182
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<g transform="matrix(.012,-0,0,-.012,15.9,16.25)"><path d="M303 0h-265v28q62 5 76 19.5t14 77.5v400q0 63 -14 77.5t-76 19.5v28h265v-28q-62 -5 -76 -19.5t-14 -77.5v-400q0 -64 14 -78t76 -19v-28z" id="x49"></path></g>
<g transform="matrix(.017,-0,0,-.017,20.588,12.162)"><path d="M300 -147l-18 -23q-106 71 -159 185.5t-53 254.5v1q0 139 53 252.5t159 186.5l18 -24q-74 -62 -115.5 -173.5t-41.5 -242.5q0 -130 41.5 -242.5t115.5 -174.5z" id="x28"></path></g><g transform="matrix(.017,-0,0,-.017,26.469,12.162)"><path d="M238 681l-124 -585q-7 -31 4 -31q10 0 37.5 18.5t49.5 41.5l16 -22q-40 -48 -89.5 -81.5t-76.5 -33.5q-42 0 -16 122l105 488q7 32 0 41t-39 9h-35l5 26q35 3 71 13t58 17.5t26 7.5q14 0 8 -31z" id="x1D459"></path></g><g transform="matrix(.017,-0,0,-.017,31.042,12.162)"><path d="M275 270q0 -296 -211 -440l-19 23q75 62 116.5 174t41.5 243t-42 243t-116 173l19 24q211 -144 211 -440z" id="x29"></path></g>
</svg>, and transversion II <svg height="16.3125" id="M262" style="vertical-align:-3.27605pt" version="1.1" viewbox="0 0 41.037498 16.3125" width="41.037498" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
<g transform="matrix(.017,-0,0,-.017,.062,12.162)"><path d="M214 21l2 -2q107 22 200 124q51 54 91 109t100 145l82 122q33 46 66 86q66 82 117 82q21 0 35.5 -13t14.5 -34q0 -18 -12.5 -30.5t-30.5 -12.5q-20 0 -32 13t-12 36h-1q-51 -29 -200 -261q-146 -229 -249 -308q-118 -92 -204 -92q-14 0 -47 6q41 38 68 89q26 47 79 182
q32 83 79 152q42 62 114 131l-3 3q-17 -5 -36 -5q-51 0 -131 41q-80 42 -110 42q-49 0 -83 -31q-35 -30 -35 -70t28 -67t72 -27q77 0 131 86l16 -9q-54 -107 -149 -107q-60 0 -99.5 35.5t-39.5 90.5q0 58 55 104q56 47 128 47q29 0 52 -10q26 -9 84 -39q59 -31 86 -31
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<g transform="matrix(.012,-0,0,-.012,15.9,16.25)"><path d="M303 0h-265v28q62 5 76 19.5t14 77.5v400q0 63 -14 77.5t-76 19.5v28h265v-28q-62 -5 -76 -19.5t-14 -77.5v-400q0 -64 14 -78t76 -19v-28z" id="x49"></path></g><g transform="matrix(.012,-0,0,-.012,19.957,16.25)"><path d="M303 0h-265v28q62 5 76 19.5t14 77.5v400q0 63 -14 77.5t-76 19.5v28h265v-28q-62 -5 -76 -19.5t-14 -77.5v-400q0 -64 14 -78t76 -19v-28z" id="x49"></path></g>
<g transform="matrix(.017,-0,0,-.017,24.638,12.162)"><path d="M300 -147l-18 -23q-106 71 -159 185.5t-53 254.5v1q0 139 53 252.5t159 186.5l18 -24q-74 -62 -115.5 -173.5t-41.5 -242.5q0 -130 41.5 -242.5t115.5 -174.5z" id="x28"></path></g><g transform="matrix(.017,-0,0,-.017,30.519,12.162)"><path d="M238 681l-124 -585q-7 -31 4 -31q10 0 37.5 18.5t49.5 41.5l16 -22q-40 -48 -89.5 -81.5t-76.5 -33.5q-42 0 -16 122l105 488q7 32 0 41t-39 9h-35l5 26q35 3 71 13t58 17.5t26 7.5q14 0 8 -31z" id="x1D459"></path></g><g transform="matrix(.017,-0,0,-.017,35.092,12.162)"><path d="M275 270q0 -296 -211 -440l-19 23q75 62 116.5 174t41.5 243t-42 243t-116 173l19 24q211 -144 211 -440z" id="x29"></path></g>
</svg>) in <svg height="12.4375" id="M263" style="vertical-align:-0.1638pt" version="1.1" viewbox="0 0 4.6999998 12.4375" width="4.6999998" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
<g transform="matrix(.017,-0,0,-.017,.062,12.162)"><path d="M238 681l-124 -585q-7 -31 4 -31q10 0 37.5 18.5t49.5 41.5l16 -22q-40 -48 -89.5 -81.5t-76.5 -33.5q-42 0 -16 122l105 488q7 32 0 41t-39 9h-35l5 26q35 3 71 13t58 17.5t26 7.5q14 0 8 -31z" id="x1D459"></path></g>
</svg> trinucleotides of the common trinucleotide circular code <svg height="15.4" id="M264" style="vertical-align:-3.3907pt" version="1.1" viewbox="0 0 19.924999 15.4" width="19.924999" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
<g transform="matrix(.017,-0,0,-.017,.062,11.112)"><path d="M775 650l-6 -28q-60 -6 -81.5 -16t-61.5 -54l-175 -191l125 -243q30 -58 48.5 -71t82.5 -19l-5 -28h-275l7 28l35 4q31 4 37 12t-6 34l-108 216q-140 -165 -177 -219q-16 -22 -10.5 -30.5t41.5 -13.5l22 -3l-7 -28h-244l8 28q52 4 75 15.5t67 52.5q48 46 206 231
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<g transform="matrix(.012,-0,0,-.012,13.525,15.187)"><path d="M241 635q53 0 94 -28.5t63.5 -76t33.5 -102.5t11 -116q0 -58 -11 -112.5t-34 -103.5t-63.5 -78.5t-94.5 -29.5t-95 28t-64.5 75t-34.5 102.5t-11 118.5q0 58 11.5 112.5t34.5 103t64.5 78t95.5 29.5zM238 602q-32 0 -55.5 -25t-35.5 -68t-17.5 -91t-5.5 -105
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</svg>.

Computational Biology Journal

tab1

Table 1

Table 1: Transition and Transversion on the Common Trinucleotide Circular Code 