Research Article

Reverse Engineering Sparse Gene Regulatory Networks Using Cubature Kalman Filter and Compressed Sensing

Table 1

Run time in seconds for EKF and CKFS algorithms for varying network sizes for synthetically generated data. The number of sample points is fixed to 50.

Number of genes 10 20 30 40

EKF 0.16 1.9 16.5 84
CKFS 1.2 4.3 11.5 24.1