Advances in Bioinformatics / 2014 / Article / Fig 7

Research Article

Objective and Comprehensive Evaluation of Bisulfite Short Read Mapping Tools

Figure 7

The effect of sequencing error on mapping efficiency for BSMAP and Bismark using simulated data generated from Sherman simulator with varying sequencing error from 0.1 to 4.75% (e.g., sequencing error 0.1% means 1 error in every 1000 bases) for read length = 101 bp, CG = 10% (10% of all CG-cytosines will be converted into thymines), and CH = 98.5% (98.5% of all CH-cytosines will be converted into thymines).
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