A Highly Conserved GEQYQQLR Epitope Has Been Identified in the Nucleoprotein of Ebola Virus by Using an In Silico Approach

Table 3

Linear B-cell epitope, antigenic regions, and surface accessible epitopes predicted from the conserved region of nucleoprotein (NP).

Peptide	Length
BepiPred analysis (linear B-cell epitope)
SSGKN	5
AMPEEETTEANA	12
TAWQ	4
HDANDAV	7
KVKN	4
KHGEYA	6
AHGS	4
VGEQYQQLREAATEAEKQLQQYAESR	26
LDDQ	4
EISF	4
IEDB analysis (antigenic sites)
KRLEELLPAVSSG	13
GQFLSFASLFLPKLVVGEKACLEK	55
VQRQIQVHAEQGLIQYPTAWQSV
GHMMVIFR
LIKFLLIHQ	9
NDAVISNSVAQA	12
FSGLLIVKTVLDHILQ	16
GVRLHPLARTA	11
SFKAALSSLAKHGEYAPFARLLNLS	25
HGLFPQLSAIALGVATA	17
GSTLAGVNVGEQYQQLRE	18
LDHLGL	6
Surface accessible epitope
MPEEETTE	8
AKVKNE	6
GEQYQQLR	8
AATEAEKQLQQYAESREL	18
FHQKKNE	7
LRKERL	6