Advances in Bioinformatics

Genome Evolution

Systems Biology: The Next Frontier for Bioinformatics

A Signal Processing Method to Explore Similarity in Protein Flexibility

Prediction of Carbohydrate-Binding Proteins from Sequences Using Support Vector Machines

Designing Efficient Spaced Seeds for SOLiD Read Mapping

Applying Small-Scale DNA Signatures as an Aid in Assembling Soybean Chromosome Sequences

Modelling Nonstationary Gene Regulatory Processes

A Comprehensive Study of Progressive Cytogenetic Alterations in Clear Cell Renal Cell Carcinoma and a New Model for ccRCC Tumorigenesis and Progression

Finding Biomarker Signatures in Pooled Sample Designs: A Simulation Framework for Methodological Comparisons

PROCARB: A Database of Known and Modelled Carbohydrate-Binding Protein Structures with Sequence-Based Prediction Tools

A Topological Description of Hubs in Amino Acid Interaction Networks

EREM: Parameter Estimation and Ancestral Reconstruction by Expectation-Maximization Algorithm for a Probabilistic Model of Genomic Binary Characters Evolution

Adaptive Evolution Hotspots at the GC-Extremes of the Human Genome: Evidence for Two Functionally Distinct Pathways of Positive Selection

Protein Bioinformatics Infrastructure for the Integration and Analysis of Multiple High-Throughput “omics” Data

Testing the Coding Potential of Conserved Short Genomic Sequences

Advances in Bioinformatics

Table of Contents

Table of Contents: 2010

Genome Evolution

Systems Biology: The Next Frontier for Bioinformatics

A Signal Processing Method to Explore Similarity in Protein Flexibility

Prediction of Carbohydrate-Binding Proteins from Sequences Using Support Vector Machines

Designing Efficient Spaced Seeds for SOLiD Read Mapping

Applying Small-Scale DNA Signatures as an Aid in Assembling Soybean Chromosome Sequences

Modelling Nonstationary Gene Regulatory Processes

A Comprehensive Study of Progressive Cytogenetic Alterations in Clear Cell Renal Cell Carcinoma and a New Model for ccRCC Tumorigenesis and Progression

Finding Biomarker Signatures in Pooled Sample Designs: A Simulation Framework for Methodological Comparisons

PROCARB: A Database of Known and Modelled Carbohydrate-Binding Protein Structures with Sequence-Based Prediction Tools

A Topological Description of Hubs in Amino Acid Interaction Networks

EREM: Parameter Estimation and Ancestral Reconstruction by Expectation-Maximization Algorithm for a Probabilistic Model of Genomic Binary Characters Evolution

Adaptive Evolution Hotspots at the GC-Extremes of the Human Genome: Evidence for Two Functionally Distinct Pathways of Positive Selection

Protein Bioinformatics Infrastructure for the Integration and Analysis of Multiple High-Throughput “omics” Data

Testing the Coding Potential of Conserved Short Genomic Sequences