Table 1: Transcriptome profiling studies on infection models in adult and embryonic zebrafish.

Bacterial speciesStrainInfection modelReference

Mycobacterium marinumM; E11Adult (IP)Meijer et al.*[182]
Mycobacterium marinumMma20; E1128hpf (CV); Adult (IP)Van der Sar et al. [22]
Mycobacterium marinumM; E11Adult (IP)Hegedus et al.* [107]
Salmonella enterica serovar Typhimurium
(Salmonella typhimurium)
SL1027;
LPS derivative
SF1592 (Ra),
28hpf (CV)Stockhammer et al.** [13]
Streptococcus suisHA9801Adult (IP)Wu et al. [183]
Salmonella enterica serovar Typhimurium
(Salmonella typhimurium)
SL1027;
LPS derivative
SF1592 (Ra),
28hpf (CV)Ordas et al.** [38]
Edwardsiella tardaFL6-6028hpf (CV)Van Soest et al. [123]
Citrobacter freundiiNot specifiedAdult (IM) Lu et al. [153]

* and **: these studies used the same samples but applied microarray analysis and deep sequencing, respectively.
(IP): intraperitoneal; (CV): caudal vein; (IM): immersion.