Pathogen Recognition and Activation of the Innate Immune Response in Zebrafish

Table 1

Transcriptome profiling studies on infection models in adult and embryonic zebrafish.

Bacterial species	Strain	Infection model	Reference
Mycobacterium marinum	M; E11	Adult (IP)	Meijer et al.^*[182]
Mycobacterium marinum	Mma20; E11	28hpf (CV); Adult (IP)	Van der Sar et al. [22]
Mycobacterium marinum	M; E11	Adult (IP)	Hegedus et al.^* [107]
Salmonella enterica serovar Typhimurium; (Salmonella typhimurium)	SL1027; LPS derivative; SF1592 (Ra),	28hpf (CV)	Stockhammer et al.^** [13]
Streptococcus suis	HA9801	Adult (IP)	Wu et al. [183]
Salmonella enterica serovar Typhimurium; (Salmonella typhimurium)	SL1027; LPS derivative; SF1592 (Ra),	28hpf (CV)	Ordas et al.^** [38]
Edwardsiella tarda	FL6-60	28hpf (CV)	Van Soest et al. [123]
Citrobacter freundii	Not specified	Adult (IM)	Lu et al. [153]

^* and ^**: these studies used the same samples but applied microarray analysis and deep sequencing, respectively.
(IP): intraperitoneal; (CV): caudal vein; (IM): immersion.