Table 1: Model Statistics. The elementary units of genome-scale metabolic models are genes, metabolites, and reactions. These models consist of (1) a metabolic network that describes the connections between metabolites through reactions (often organized by metabolic subsystem), (2) gene-protein-reaction rules that map the gene dependencies of reactions, and (3) connection to their environment through exchange transport reactions.

OrganismModelGenesMetabolitesReactionsTransportSubsystemsCitation

H. salinarumiOG490490557711111NA[13]
iOG47847854566497NA[14]

M. acetivoransiVS9419417087057160[15]
iMB7457457158186930[16]
iMAC8688687078399131[17]
iST8078077337597030[18]

M. barkeriiAF692692558619888[19]
iMG7467467188157431[20]

M. hungateiiMhu4284286397214129[21]

M. jannaschiiiTS4364365106091113[22]

M. maripaludisiMM51851860557049117[23]

M. mazeiiSS85NA74855NA[6]

M. smithiiiMsi38538558252535NA[24]

N. pharaonisiOG65465459768388NA[25]

S. solfataricusiTU5155157057185865[26]