Research Article

Genetic Diversity and Phylogenetic Analysis of Citrus tristeza virus Isolates from Turkey

Table 2

Percent nucleotide (nt) and amino acid (aa) identity of the CP genes of CTV isolates from different citrus growing regions of Turkey.

IsolatesEG-28 (EK-5)AC-10 (KE-3)EG-5 (EK-1)AC-5 (KE-1)EM-15 (DA-5)EBS-7 (DK-1)WM-22 (BA-1)WM-22 (BA-2)EM-1 (DA-1)EM-1 (DA-2)EM-7 (DA-3)EBS-38 (DK-4)EG11 (EK-2)AC-24 (KE-4)

EBS-20 (DK-1)nt10099979793929393919292939392
aa10097969794969594919293959595
EG-28 (EK-5)nt98979792929393919292939392
aa97979794969695919294959595
AC-10 (KE-3)nt979692929393919392939293
aa969694959494919394959594
EG-5 (EK-1)nt9991939292919192929392
aa10094989595929395969696
AC-5 (KE-1)nt91939393919292939393
aa95989696929496979796
EM-15 (DA-5)nt939494929493949393
aa959493909595949494
EBS-7 (DK-1)nt9696959696969797
aa9696939596999998
WM-22 (BA-1)nt99969797979898
aa98949697999998
WM-22 (BA-2)nt969797979898
aa949697999998
EM-1 (DA-1)nt9797979797
aa9395959595
EM-3 (DA-2)nt98999898
aa96979796
EM-7 (DA-3)nt989898
aa999998
EBS-38 (DK-4)nt9999
aa100100
EG-11 (EK-2)nt99
aa100