BioMed Research International / 2009 / Article / Tab 1

Research Article

Adding to Yersinia enterocolitica Gene Pool Diversity: Two Cryptic Plasmids from a Biotype 1A Isolate

Table 1

ORFs identified on plasmid pYe4449-1.

Position (bp)StrandSize (aa) (kDa) IdentitiesExpectBest BlastP /functionAccession number

ccdA298–537 79910.1356/79 (70%)2e-26CdcA-like protein (Salmonella enterica subsp. enterica serovar Derby) gb AAV53396.1
ccdB537–845 10211.065.0270/102 (68%)5e-36cytotoxic protein CcdB(Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480) ref ZP_02659678.1
mobA848–2419 52359.28.42289/514 (56%)3e-133putative relaxase/mobilization nuclease MobA (Plesiomonas shigelloides) emb CAB56514.1
mobC2409–2735 10812.510.1884/109 (77%)4e-37putative mobilization protein (Plesiomonas shigelloides) emb CAB56514.1
ORF 52981–3481 16618.76.41hypothetical protein
repA3481–4227 24828.28.83184/244 (75%)9e-103replication initiation protein A (Klebsiella sp. KCL-2)ref NP_620615.1

ene names according to putative conserved protein domains if available. olecular weights and isoelectric points are calculated using the algorithm from ExPASy’s Compute pI/Mw program. nly significant BlastP matches with e-values below e-10 are listed; all others are indicated as “hypothetical protein” and show e-values above 0.1.

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