|
Genes/proteins associated with CVD and atherosclerosis | Technique utilized | Change | References |
|
Gene | Protein | Accession | | | |
Genes differentially expressed in PBMCs from SLE patients | | | |
|
IFN target genes | | | |
IFIT1 | Interferon-induced protein with tetratricopeptide repeats-1 | X06559 | | Up | |
G1P3 | Interferon, alpha-inducible protein (IFI-6-16) | U22970 | | Up | |
IFIT4 | Interferon-induced protein with tetratricopeptide repeats 4 | O14879 | | Up | |
PLSCR1 | Phospholipid scramblase 1 | O15162 | | Up | |
G1P2 | Interferon, alpha-inducible protein (IFI-15K) | M21786 | | Up | |
IRF7 | Interferon regulatory factor 7 | Q92985 | | Up | |
THBS1 | Thrombospondin 1 | J04835 | | Up | |
FCGR1A | Fc fragment of IgG, high-affinity Ia receptor | M63830 | | Up | |
USP20 | Ubiquitin specific protease 20 | Y17457 | | Down | |
MATK | Megakaryocyte-specific tyrosine kinase | S75164 | | Down | |
TNF and TNF receptor families | | | |
TNFSF10 | TNF-related apoptosis inducing ligand (TRAIL) | U37518 | DNA microarrays | Up | [73ā80] |
TNFRSF10C | TRAIL receptor 3 | O14798 | | Up | |
FAS | Fas (TNF receptor superfamily, member 6) | D31968 | | Up | |
Chemokines and chemokine receptors | | | |
CCR7 | Chemokine (C-C motif) receptor 7 | L31584 | | Up | |
IL8RB | Interleukin 8 receptor, beta | M99412 | | Up | |
Cell surface activation antigens | | | |
CD69 | CD69 molecule | Z30426 | | Up | |
Fc receptors | | | |
FCGR1A | Fc-gamma receptor I A1 | M63830 | | Up | |
FCGR2A | Fc fragment of IgG, low affinity IIa, receptor (CD32) | A21604 | | Up | |
Metalloproteinases | | | |
MMP3 | Matrix metallopeptidase 3 | J04732 | | Up | |
MMP9 | Matrix metallopeptidase 9 | D10051 | | Up | |
Defensins | | | |
DEFA3 | Defensin 3, neutrophil-specific | L12691 | | Up | |
|
Single nucleotide polymorphism (SNP) association scans | | | |
Gene | Protein | SNPs | Effect | | References |
|
TNFAIP3 | De-ubiquitinating enzyme A20 | rs13192841 rs2230926 rs6922466 | Reduced expression and activity of A20 | | [83] |
IRF5 | IFN-regulatory factor 5 | rs2004640 | Increased risk for SLE | | [84] |
STAT4 | Transcription factor | rs7574865 | Increased risk for SLE | | [85] |
|