BioMed Research International

Research Article

MHC Class II Binding Prediction—A Little Help from a Friend

Table 1

Servers for MHC class II binders prediction used in the study.
ServerMethodURL
NetMHCIIAN N a http://www.cbs.dtu.dk/services/NetMHCII/
NetMHCIIpanANNhttp://www.cbs.dtu.dk/services/NetMHCIIpan/
ProPredQ M b http://www.imtech.res.in/raghava/propred/
RANKPEPQMhttp://bio.dfci.harvard.edu/RANKPEP/
IEDB-ARBQMhttp://tools.immuneepitope.org/analyze/html/mhc_II_binding.html
IEDB-SMMQMhttp://tools.immuneepitope.org/analyze/html/mhc_II_binding.html
EpiTOPQMhttp://www.pharmfac.net/EpiTOP/
MHC2PredSV M c http://www.imtech.res.in/raghava/mhc2pred/
a ANN: artificial neural networks, b QM: quantitative matrix, c SVM: support vector machine.