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ABL: | | |
F-ABL-A2: | -TGA CTT TGA GCC TCA GGG TCT GAG TGA AGC C- | |
R-ABL-A3: | -CCA TTT TTG GTT TGG GCT TCA CAC CAT TCC- | |
Annealing temperature: | C | |
Reference sequence (mRNA): | GenBank:NM_007313 | |
Reference sequence (genomic DNA): | GenBank:U07563 | |
Nucleotide position (mRNA): | 159–374 | |
Nucleotide position (genomic DNA): | 49914–50692 | |
RT-PCR product: | 216 bp | |
PCR product: | 779 bp | |
Taq polymerase: | TaKaRa ExTaq HS (Lonza) | |
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EBV: | | |
F-EBV (TC-70): | -CTT GGA GAC AGG CTT AAC CAG ACT CA- | |
R-EBV (TC-72): | -CCA TGG CTG CAC CGA TGA AAG TTA T- | |
Annealing temperature: | C | |
Reference sequence: | GenBank: V01555 | Nucleotide positions: 83520–83784 |
PCR product (wild type): | 265 bp | PCR product (internal control): 445 bp |
Taq polymerase: | TaKaRa Taq HS (Lonza) | |
|
HBV: | | |
F-HEPB: | -AAG CTG TGC CTT GGG TGG CTT- | |
R-HEPB: | -CGA GAT TGA GAT CTT CTG CGA C- | |
Annealing temperature: | C | |
Reference sequence: | GenBank: NC_003977 | Nucleotide positions: 1874–2436 |
PCR product (wild type): | 563 bp | PCR product (internal control): 906 bp |
Taq polymerase: | BioTherm Taq polymerase (Gene Craft, Lüdinghausen, Germany) |
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HCV: | | |
F-HCV: | -GCC ATG GCG TTA GTA TGA GT- | |
R-HCV: | -RTG CAC GGT CTA CGA GAC CT- | |
Annealing temperature: | C | |
Reference sequence: | GenBank: NC_004102 | Nucleotide positions: 82–340 |
PCR product (wild type): | 259 bp | PCR product (internal control): 452 bp |
Taq polymerase: | TaKaRa ExTaq HS (Lonza) | |
|
HHV-8: | | |
F-HHV-8: | -AGC CGA AAG GAT TCC ACC AT- | |
R-HHV-8: | -TCC GTG TTG TCT ACG TCC AG- | |
Annealing temperature: | C | |
Reference sequence: | GenBank: NC_009333 | Nucleotide positions: 47386–47618 |
PCR product: | 232 bp | |
Taq polymerase: | TaKaRa ExTaq HS (Lonza) | |
|
HIV-1: | | |
F-HIV (SK38): | -ATA ATC CAC CTA TCC CAG TAG GAG AAA T- | |
R-HIV (SK39): | -TTT GGT CCT TGT CTT ATG TCC AGA ATG C- | |
Annealing temperature: | C | |
Reference sequence: | GenBank: NC_001802 | Nucleotide positions: 1090–1204 |
PCR product (wild type): | 114 bp | PCR product (internal control): 403 bp |
Taq polymerase: | TaKaRa Taq HS (Lonza) | |
|
HTLV-I/-II: | | |
F-HTLV (SK110): | -CCC TAC AAT CCA ACC AGC TCM G- | |
| -CCT TAC AAT CCA ACC AGC TCA G- | |
| -CCA TAC AAC CCC ACC AGC TCA G- | |
R-HTLV (SK111): | -GTG RTG GAT TTG CCA TCG GGT T- | |
| -GTG GTG AAG CTG CCA TCG GGT T- | |
Annealing temperature: | C | |
Reference sequence: | GenBank: NC_001436 | Nucleotide positions: 4384–4569 |
PCR product (wild type): | 186 bp | PCR product (internal control): 405 bp |
Taq polymerase: | TaKaRa Taq HS (Lonza) | |
|
SMRV: | | |
F-SMRV-env: | -GGC GGA CCC CAA GAT GCT GTG- | |
R-SMRV-env: | -TGG GCT AGG CTG GGG TTG GAG ATA- | |
Annealing temperature: | C | |
Reference sequence: | GenBank: M23385 | Nucleotide positions: 6857–7053 |
PCR product: | 197 bp | |
Taq polymerase: | TaKaRa Ex Taq HS (Lonza) | |
F-SMRV-gag: | -TCA GAG CCC ACC GAG CCT ACC TAC- | |
R-SMRV-gag: | -CAG CGC AGC ACG AGA CAA GAA AA- | |
Annealing temperature: | C | |
Reference sequence: | GenBank: M23385 | Nucleotide positions: 1737–1922 |
PCR product: | 186 bp | |
Taq polymerase: | TaKaRa Taq HS (Lonza) | |
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