Application of Serial Analysis of Gene Expression to the Study of the Gene Expression Profile of Leishmania infantum chagasi Promastigote

Table 4

Most abundant and annotated transcript and corresponding tags identified in the library of L. i. chagasi promastigotes.

Ord.	Long tag	Frequ.	Gene/protein	Gene ID
1	CATGCGCGCGATGGTGCCCCC	125	elongation factor 1 alpha	LinJ.17.0100
2	CATGCGACTTAGACCGTGAGG	91	histone H1	LinJ.27.1070
3	CATGGGCGCACGGCGGCGCCG	68	heat shock protein 83-1	LinJ.33.0350
4	CATGGGCTTCCTCGAGTCCGC	60	histone H3	LinJ.10.1050
5	CATGGAGGAGGGCGAGTTCTC	57	Leishmania infantum JPCM5 alpha tubulin	LinJ.13.0330
6	CATGCTCCATAAAGGAGAGAC	53	heat-shock protein hsp70, putative	LinJ.28.3000
7	CATGCGGTACTGCGTTCCAGA	47	ribosomal protein L23, putative	LinJ.35.3840
8	CATGGCGGCCGCAAAAGCAGG	43	40S ribosomal protein S17, putative	LinJ.28.2750
9	CATGACTGGACATTCAAAAGA	41	histone H1, putative	LinJ.27.1070
10	CATGCGAAAATGTGGTTTCGC	39	60S ribosomal protein L7a, putative	LinJ.07.0550
11	CATGAGCGGCCACCCGCTTGT	38	ubiquitin-fusion protein	LinJ.31.1930
12	CATGCGTGGACGATTTCAAAG	36	ribosomal protein S29, putative	LinJ.28.2360
13	CATGCCGGCAGCACACCAACA	35	histone h4	LinJ.06.0010
14	CATGCCCTTCATTTTCCTCCC	32	RNA binding protein, putative	LinJ.32.0790
15	CATGCGCCCTTTCATTTTAAC	29	hypothetical protein, conserved	LinJ.33.0970
16	CATGACGCTCTTGCCAACCTG	28	ribosomal protein s26, putative	LinJ.30.3240
17	CATGCGAAAAACAGCACAGCA	27	60S ribosomal protein L6, putative	LinJ.15.1060
18	CATGGCTGCCGCTACCGCAGC	26	ribosomal protein s11 homolog	LinJ.20.1620
19	CATGATCAGATTTTGTTTTGT	26	ribosomal protein L3, putative	LinJ.34.2730
20	CATGTGCGTGCCGGTGCCGGT	25	hypothetical protein, conserved	LinJ.32.2840
21	CATGCGGCTTGTTTATCCTTT	25	60S ribosomal protein L12, putative	LinJ.35.2230
22	CATGCGGGCGCGGACTTTGCG	24	ribosomal protein L24, putative	LinJ.36.1130
23	CATGCGCGAGGGCTGTGAAGC	24	hypothetical protein, conserved	LinJ.27.0130
24	CATGTGCAAGACTCACGTCCA	23	ribosomal protein S25	LinJ.34.0460
25	CATGGTCGTTTTGCGGGCAGC	22	hypothetical protein, conserved	LinJ.13.0270
26	CATGAAATGAAAAGGAAAGGC	22	ribosomal protein L15, putative	LinJ.30.3710
27	CATGTGGATCGCGGGGTGCCA	22	60S ribosomal protein L2, putative	LinJ.32.4050
28	CATGGTGGACAGTGGCGAGCG	22	60S acidic ribosomal subunit protein,	LinJ.27.1300
29	CATGGCAGCTGCCGCTGCGTC	21	60S ribosomal protein L34, putative	LinJ.36.3930
30	CATGGGATGGAAGGCATCGCA	20	ATP-dependent zinc metallopeptidase,	LinJ.18.0620
31	CATGCAGAGAGAAGCAGTGCA	20	heat shock protein 83-1	LinJ.33.0350
32	CATGTGCTGTGATCCGTGTGT	20	hypothetical protein, conserved	LinJ.24.2290
33	CATGTATGCCTAAAGTACCAC	20	hypothetical protein, conserved	LinJ.31.0920
34	CATGGGAAACACTCTGCGCCC	19	60S ribosomal protein L19, putative	LinJ.06.0430
35	CATGACGGTGGGTGCGCTAAT	18	hypothetical protein, conserved	LinJ.30.3590

This table shows the 35 most abundant and annotated tags aligning to only one gene, their occurrences in the L. i. chagasi library, their corresponding name and gene ID in GeneDB.