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| Chromosome aberration | Gene name | Fusion variants | Probe name | Sequence ( to ) | Position on microarray |
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| t(8;21)(q22;q22) | AML1-ETO | AML1-ETO | AML1-ETO | CCCGAGAACCTCGAAATCGTACTGAGAAG | A-1abc |
| | | | AML1ex5 | CTCAGGTTTGTCGGTCGAAGTGGAAGAGG | A-2abc |
| | | | ETO | GCCAGACTCACCTGTGGATGTGAAGACGCAA | A-3abc |
|
| t(15;17)(q22;q21) | PML-RARA | L-form | PML-RARA-L | CCGGGGAGGCAGCCATTGAGACCCAGAG | B-1abc |
| | | S-form | PML-RARA-S | CACCCAGGGGAAAGCCATTGAGACCCAGAG | B-2abc |
| | | | PML-L | CAGAAGAGGAAGTGCAGCCAGACCCAGTGCC | B-3abc |
| | | | PML-S | AGAGGATGAAGTGCTACGCCTCGGACCAG | B-4abc |
| | | | RARA | CCCTCTACCCCGCATCTACAAGCCTTGCTT | B-5abc |
|
| t(11;17)(q23;q21) | PLZF-RARA | PLZF-RARA | PLZF-RARA | CTTACTGGCTCATTCAGCCATTGAGACCCAGA | C-1abc |
| | | | PLZF | GGGATGAAGACGTACGGGTGCGAGCTCTG | C-2abc |
|
| t(5;17)(q35;q22) | NPM1-RARA | L-form | NPM1-RARA-L-1 | AGGAGGAGGATGTGAACAGGGTTTTATTTATGAA | C-3abc |
| | | S-form | NPM1-RARA-L-2 | GTTGGAAATTGGCAGCCATTGAGACCCAGA | C-4abc |
| | | | NPM1-RARA-S | GTGGACAGCACTTAGTAGCCATTGAGACCCAGA | C-5abc |
| | | | NPM1 | ACACCACCAGTGGTCTTAAGGTTGAAGTGTGG | C-6abc |
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| inv(16)(p13q22) | CBFB-MYH11 | A | CBFB-MYH11-A | CGGGAGGAAATGGAGGTCCATGAGCTGGAGA | D-1abc |
| | | D | CBFB-MYH11-D | CGGGAGGAAATGGAGAATGAAGTTGAGAGCG | D-2abc |
| | | E | CBFB-MYH11-E | CGGGAGGAAATGGAGGCCAAGGCGAACC | D-3abc |
| | | | CBFB | CACGCGAATTTGAAGATAGAGACAGGTCTCA | D-4abc |
| | | | MYH11-A | ACCCAGATGGAGGAGATGAAGACGCAGC | D-5abc |
| | | | MYH11-DE | GACACCCAGGAGTTGCTTCAAGAA | D-6abc |
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| t(12;21)(p13;q22) | TEL-AML1 | TEL-AML1ex2 | TEL-AML1ex2 | ATTGGGAGAATAGCAGAATGCATACTTGGAATG | G-1abc |
| | | TEL-AML1ex3 | TEL-AML1ex3 | ATTGGGAGAATAGCAGATGCCAGCACGAGC | G-2abc |
| | | | TEL | ATCGGGAAGACCTGGCTTACATGA | G-3abc |
| | | | AML1ex3 | GCCGCTTCACGCCGCCTTCCACCGC | G-4abc |
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| t(1;19)(q23;p13) | E2A-PBX1 | I | E2A-PBX1-I | CCCGACTCCTACAGTGTTTTGAGTATCCGAGG | H-1abc |
| | | Ia | E2A-PBX1-Ia | TACAGTGATGAAAGTGTTCGGTCACCTGGAACCTTTTTG | H-2abc |
| | | | E2A | CCTCAGGTTTCACCGGCCCCATGTCACT | H-3abc |
| | | | PBX1 | TGGACAACATGCTGTTAGCGGAAGGCGTGG | H-4abc |
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| t(9;22)(q34;q11) | BCR-ABL | p190 | p190 | TTCCATGGAGACGCAGAAGCCCTTCAGCGGC | J-1abc |
| | | p210 b2a2 | p210-b2a2 | TGACCATCAATAAGGAAGAAGCCCTTCAGCG | K-1abc |
| | | p210 b3a2 | p210-b3a2 | CTGGATTTAAGCAGAGTTCAAAAGCCCTTCAGCGGC | K-2abc |
| | | p230 | p230 | AGCCTTCGACGTCAAAGCCCTTCAGCG | K-4abc |
| | | | BCR190 | GGGCGTCCGCAAGACCGGGCAGATCTGG | J-2abc |
| | | | BCR210 | AGAACATCCGGGAGCAGCAGAAGAAGTGTTT | K-3abc |
| | | | BCR230 | TGGAGGAGATCGAGCGCCGAGGCATGGAGG | K-5abc |
| | | | ABL | CCAAGGCTGGGTCCCAAGCAACTACATCACG | K-6abc |
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| del(1)(p32;p32) | SIL-TAL1 | I | SIL-TAL1-I | CGCGGAAGTTGCGGATGACCGAGCGGC | I-1abc |
| | | II | SIL-TAL1-II | CGCGGAAGTTGCGATCGCCCAGGACCA | I-2abc |
| | | III | SIL-TAL1-III | CCTCCCAAAATGCTGATCGCCCAGGACCA | I-3abc |
| | | | SIL | GGCTCCCGCTCCTACCCTGCAAACAGA | I-4abc |
| | | | TAL1 | GCCGAGCGAGGCGGCTCGCAGTGACCC | I-5abc |
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| t(4;11)(q21;q23) | MLL-AF4 | | MLL | CCCAAAACCACTCCTAGTGAGCCCA | F-1abc |
| | | | AF4 | TCAAAAACTCACTCAAATTCTCAGCAAG | F-2abc |
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| t(9;11)(p22;q23) | MLL-AF9 | | AF9 | ACCTGGAAACATCTGGAACATCCTGAGGA | E-1abc |
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| t(11;19)(q23;p13.3) | MLL-ENL | | ENL | GGGTTCACTCACGACTGGATGGTGTTTGTCCG | E-2abc |
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| t(11;19)(q23;p13.1) | MLL-ELL | | ELL | CCAGCAGTATGTCTCCAGTCATGGGGAAGT | E-3abc |
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| t(6;11)(q27;q23) | MLL-AF6 | | AF6 | TTCGACCTGATATGCGAATGCTGTCCTCTC | E-4abc |
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| t(10;11)(p12;q23) | MLL-AF10 | A:2222 | AF10-A | GCTTACAGATTCGCTATGATCAACCAGGCA | E-5abc |
| | | B:979 | AF10-B | GTTTCAGAGACTAGAGGGTCAGAGGGCA | E-6abc |
|
| | GUS | | GUS | CAGTCACCGACGAGAGTGCTGGGGA | L-1abc, 3abc, 5abc |
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