ASPic-GeneID: A Lightweight Pipeline for Gene Prediction and Alternative Isoforms Detection

Figure 4

ASPic and ASPic-GeneID performance on ENCODE according to EST coverage. The accuracy [(Sn + Sp)/2] of ASPic CDS predictions (A) and ASPic-GeneID predictions (AG) is plotted according to the proportion of available ESTs given as input to ASPic. The percent coverage of annotated introns by the input ESTs is also given. SSn, SSe, SSi, and SSt indicate the accuracy at nucleotide, exon, intron, and transcript level, respectively.