Research Article

Genetically Distinct Glossina fuscipes fuscipes Populations in the Lake Kyoga Region of Uganda and Its Relevance for Human African Trypanosomiasis

Table 1

Sample sizes and genetic diversity statistics for the mitochondrial CO1 and 15 microsatellite loci in 23 populations of G. f. fuscipes, on samples analyzed for this study (a) and from previous studies (Abila et al., 2008 [24]; Beadell et al., 2010 [25]; and Echodu et al., 2011 [26]).

PopulationCodeDate of samplingMicrosatellitesMitochondrial DNA
No.
haplotypes
Hd

KafuKF-0Feb 2010304.5000.5010.5260.0651620.2330.00345
KF-10Jul 201143.4380.5090.5250.197210.0000.0000
KarumaKR-0Feb 2010407.6670.5710.6520.1371230.4390.00641
KR-10Jul 2011206.0560.6040.6390.08830.7140.00664
PutiputiPTOct 2009264.0000.5250.5640.0382220.2470.00104
TororoTROct 200921.9440.4720.347−0.03
IgangaIGGFeb 2011656.0000.5350.5560.03310100
KisokoKISFeb 201183.5550.5270.542−0.06
MayugeMGGFeb 2011595.6000.5450.5570.0271540.3710.00334
NamutumbaNAM165.2670.5530.6100.093140.5740.00517
NambogoNBJun 2011174.3330.5920.584−0.031420.1430.00272
SangaloSADec 2011154.0000.4500.4960.0871530.2570.0056
TubaTBJun 2011285.2670.5790.5830.0051520.2480.00105
AminakwachAMJul 2011304.7330.5370.5550.0681620.1250.00056
BukedeaBKDMay 2011254.4290.4950.5410.0981430.4730.00170
OculoiOCJul 2011204.7860.6390.612−0.0151630.5920.0036
KitgumKTJan 2012175.3330.552010.627900.1261030.6000.00184
BudakaBK*804.7780.5090.5270.0411110.0000.0000
BunghaziBN-0*Mar 2008324.20.5290.5780.0791530.6480.00538
BN-08+Mar 2009403.90.5680.6090.068
BN-12+Oct 2009654.10.5490.5740.1161640.6920.00466
BN-24Jun 2011185.3480.6310.6310.061320.3850.00244
BusiimeBU-0*+Mar 2008393.50.4760.4850.0461710.0000.0000
BU-8+Mar 2009403.40.4640.4770.025
BU-12+Oct 2009403.40.4640.4890.0371910.00000.0000
JundaJN-0*+Mar 2008403.20.4790.4890.0231930.4440.00731
JN-13+Jan 2010183.10.4600.4850.0651810.0000.00000
JN-24Jul 201133.0910.4070.333−0.0231
MukongoroMK-0*+Mar 2008402.90.4870.460−0.0412120.4950.00093
MK-08+Mar 2009243.00.4550.431−0.043
MK-12+Nov 2009223.10.4180.4450.0682120.4670.00088
MasindiMS-0*+Mar 2008403.70.5680.547−0.0251820.4670.001886
MS-13+Jan 2010174.40.5620.5970.0551720.4710.00964
MS-25Jul 2011304.7220.5420.55330.0391520.4190.00620
OkameOK-0*+Mar 2008393.30.4520.5070.0811730.4710.0094
OK-8+Mar 2009403.40.5630.5460.008
OK-12+Oct 2009393.40.5470.5520.0361820.2940.00055
OtuboiOT-0*+Jul 2008534.00.5080.5350.0852030.4260.0122
OT-11+Nov 2009403.70.5140.5400.0762040.5370.00131

: number of individuals analyzed, : allelic richness, : observed heterozygosity, : expected heterozygosity, : Fisher’s inbreeding coefficient; Hd: haplotype diversity, π: nucleotide diversity. Dashes indicate sites from which mtDNA was not collected, *indicates samples used in Beadell et al. (2010) [25], and +indicates samples used in Echodu et al. 2011 [26].