Simpute: An Efficient Solution for Dense Genotypic Data

Table 5

Error rates* for Simpute, BEAGLE, and Jung’s method with random missing study on the six SNPs of chromosome 22.

Missing rate/method	Simpute	BEAGLE	Jung’s method
5%	1.358%	1.7531%	16.59%
10%	1.8944%	2.1429%	17.82%
15%	3.0207%	3.4132%	20.25%
20%	4.4472%	4.4907%	20.07%

^∗Error rates = number of error imputed entries/number of missing entries *100%.