Biodegradation Ability and Catabolic Genes of Petroleum-Degrading Sphingomonas koreensis Strain ASU-06 Isolated from Egyptian Oily Soil

Table 1

List of primers used for detection of mono- and dioxygenase genes.

Primer	Sequence (5′ to 3′)	Expected size (bp)	Reference
alkBF; alkBR	5′-AACTACMTCGARCAYTACGG-3′; 5′-TGAMGATGTGGTYRCTGTTCC-3′	100	Powell et al. [22]
AlkB1F; AlkB1R	5′-TACGGGCACTTCGCGATTGA-3′; 5′-CGCCCAGTTCGAMACGATGTG-3′	550	Kloos et al. [13]
nahAc F; nahAc R	5′-TGGCGATGAAGAACTTTTCC-3′; 5′-AACGTACGCTGAACCGAGTC-3′	487	Laurie and Jones [14]
PAH-RHD-GPf; PAH-RHGPr	5′-CGG CGC CGA CAA YTT YGT NGG-3′; 5′-GGG GAA CAC GGT GCC RTG DAT RAA-3′	292	Cébron et al. [12]
C12OF; C12OR	5′-GCCAACGTCGACGTCTGGCAGCA-3′; 5′-CGCCTTCAAAGTTGATCTGCGTGGTTGGT-3′	350	Sei et al. [23]
C23OF; C23OR	5′-AAGAGGCATGGGGGCGCACCGGTTCGA-3′; 5′-TCACCAGCAAACACCTCGTTGCGGTTGCC-3′	900	Sei et al. [23]