Identification of a Chicken Anemia Virus Variant-Related Gyrovirus in Stray Cats in China, 2012
Figure 4
(a) Phylogenetic analysis of 37 CAV isolates in different species based on the genomic sequence. The three analyzed sequences (AF311900, JQ690762, and CAV variant) are indicated in red. The putative mosaic was indicated with “red dot.” (b) and (c), respectively, represent the nonrecombinant region (159-2,009) and the recombinant region (2,100-158). The putative recombination is shown with a “red square” and the putative parental lineages are shown with a “blue triangle.” The DQ217400 strain was used as an outgroup. The whole sequences were analyzed by using MEGA5.1 software with neighbor-joining (NJ) phylogenetic tree methods together with the novel sequence. Each tree was produced using a consensus of 1000 bootstrap replicates.
