An Integrated Analysis of miRNA, lncRNA, and mRNA Expression Profiles
Figure 6
Integrative expression analysis of mRNA-lncRNA and miRNA-lncRNA based on their locations. ((a)-(b)) Schematic representation of expression of mRNA-lncRNA (Table 3). Some of these mRNA genes and lncRNA genes are always located on sense/antisense strands in specific genomic regions. Others are located in the same genomic region but are of different lengths. Some show the same deregulation patterns with different fold changes (log 2) (upregulation: red, downregulation: blue), and others show different deregulation patterns. ((c)–(e)) mRNA-lncRNA integrative analysis based on genomic location. The ordinate axis indicates the number of deregulated mRNAs or lncRNAs. The term “the-same” indicates that mRNA and lncRNA are located on the same strand. The term “the-different” indicates that mRNA and lncRNA are located on sense/antisense strands. ((f)–(h)) miRNA-lncRNA integrative analysis based on genomic location. The ordinate axis indicates the number of deregulated miRNAs or lncRNAs. The term “the-same” indicates that miRNA and lncRNA are located on the same strand. The term “the-different” indicates that miRNA and lncRNA are located on sense/antisense strands.
