Research Article
Identifying Dynamic Protein Complexes Based on Gene Expression Profiles and PPI Networks
Algorithm 2
The description of algorithm DPC.
Algorithm DPC | Input: : a PPI network; Ge: gene expression data; | : the threshold of gene expression; : the threshold of density. | Output: PC: protein complexes | (1) Call DetectingPPC; | (2) ; | (3) For each node do | For all do | Compute ; | if then | CL(); | (4) For each time course do | For each node do | if Ge | ; | ; | For each core do | PC = PC ∪ ; | (5) Filtering PC | (6) Output PC |
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