Research Article
Sequence Alignment Tools: One Parallel Pattern to Rule Them All?
Table 5
Perf Stat analysis on Human-Ref19-1, 2-3 Kbp for different implementations of Bowtie2.
| Metric | bt-2.2.1 | bt-2.0.6 | bt-FF |
| CPUs utilised | 28.665 | 19.661 | 24.363 | CPU-migrations | 1,363 | 3,513 | 57 | IPC | 0.19 | 0.98 | 1.03 | L1-dcache-misses | 42.46% | 32.91% | 32.14% | (of all L1-dcache hits) | LLC-load-misses | 80.87% | 58.66% | 67.91% | (of all LL-cache hits) | Execution time (s) | 96.87 | 24.41 | 19.05 |
|
|