Erratum to “Quantification of Human and Animal Viruses to Differentiate the Origin of the Fecal Contamination Present in Environmental Samples”
Table 1
Oligonucleotide primers and probes used for the detection and quantification of viral indicators.
Primers and probes
Virus
Positiona
Reference
Sequence (5′-3′)
ADF
Human adenovirus (HAdV)
18869–18887
26
CWTACATGCACATCKCSGG
ADR
18919–18937
CRCGGGCRAAYTGCACCAG
ADP1
18889–18916
FAM-CCGGGCTCAGGTACTCCGAGGCGTCCT-BHQ1
JE3F
JC polyomavirus (JCPyV)
4317–4339
27
ATGTTTGCCAGTGATGATGAAAA
JE3R
4251–4277
GGAAAGTCTTTAGGGTCTTCTACCTTT
JE3P
4313–4482
FAM-AGGATCCCAACACTCTACCCCACCTAAAAAGA-BHQ1
QB-F1-1
Bovine polyomavirus (BPyV)
2122–2144
28
CTAGATCCTACCCTCAAGGGAAT
QB-R1-1
2177–2198
TTACTTGGATCTGGACACCAAC
QB-P1-2
2149–2174
FAM-GACAAAGATGGTGTGTATCCTGTTGA-BHQ1
Q-PAdV-F
Porcine adenovirus (PAdV)
20701–20718
29
AACGGCCGCTACTGCAAG
Q-PAdV-R
20751–20768
AGCAGCAGGCTCTTGAGG
Q-PAdV-P
20722–20737
FAM-CACATCCAGGTGCCGC-BHQ1
qOv_F
Ovine polyomavirus (OPyV)
VP region
30
CAGCTGYAGACATTGTGG
qOv_R
TCCAATCTGGGCATAAGATT
qOv_P
FAM-ATGATTACCAAGCCAGACAGTGGG-BHQ1
Q-PaV-F
Chicken/turkey parvovirus (ChPV/TuPV)
3326–3345
31
AGTCCACGAGATTGGCAACA
Q-PaV-R
3388–3407
GCAGGTTAAAGATTTTCACG
Q-PaV-Pr
3356–3378
6FAM-AATTATTCGAGATGGCGCCCACG-BHQ1
aThe sequence positions are referred to strains J01917.1 (HAdV), NC_001699.1 (JCPyV), D13942 (BPyV), AJ237815 (PAdV), and GU214706 (ChPV/TuPV) from Genbank. bVP1: virion protein 1.
