Review Article

Alternative Splicing Generates Different Parkin Protein Isoforms: Evidences in Human, Rat, and Mouse Brain

Table 7

Rattus norvegicus.

New code identifierAb #1Ab #2Ab #3Ab #4Ab #5Ab #6Ab #7Ab #8Ab #9Ab #10Ab #11Ab #12Ab #13Ab #14Ab #15

R13May be (306 aa)May be (5 aa)May be (69 aa)May be (14 aa)YesYesYesMay be (66 aa)May be (248 aa)May be (14 aa)May be (180 aa)May be (15 aa)May be (48 aa)May be (13 aa)May be (48 aa)
R4May be (307 aa)May be (5 aa)May be (69 aa)May be (14 aa)YesYesYesMay be (66 aa)May be (247 aa)May be (14 aa)May be (179 aa)May be (15 aa)May be (48 aa)May be (13 aa)May be (49 aa)
R1May be (307 aa)May be (5 aa)May be (70 aa)May be (14 aa)YesYesYesMay be (66 aa)May be (249 aa)May be (14 aa)May be (180 aa)May be (15 aa)May be (49 aa)May be (13 aa)May be (49 aa)
R5May be (305 aa)May be (5 aa)May be (69 aa)May be (14 aa)YesYesYesMay be (31 aa)May be (247 aa)May be (14 aa)May be (179 aa)May be (15 aa)May be (48 aa)May be (13 aa)May be (48 aa)
R8May be (279 aa)May be (5 aa)May be (69 aa)May be (14 aa)YesYesYesMay be (66 aa)May be (221 aa)May be (14 aa)May be (153 aa)May be (15 aa)May be (48 aa)May be (13 aa)May be (48 aa)
R15May be (254 aa)May be (5 aa)May be (73 aa)May be (14 aa)YesYesYesMay be (66 aa)May be (248 aa)May be (14 aa)May be (153 aa)May be (15 aa)May be (49 aa)May be (13 aa)May be (49 aa)
R10May be (173 aa)May be (5 aa)May be (69 aa)May be (14 aa)YesYesYesMay be (9 aa)May be (248 aa)NoMay be (180 aa)NoMay be (48 aa)NoMay be (48 aa)
R19May be (162 aa)NoMay be (70 aa)NoYesYesYesMay be (68 aa)May be (173 aa)May be (14 aa)May be (74 aa)May be (15 aa)May be (49 aa)May be (13 aa)May be (49 aa)
R2May be (147 aa)NoMay be (72 aa)NoYesYesYesMay be (68 aa)May be (156 aa)May be (14 aa)May be (55 aa)May be (15 aa)May be (48 aa)May be (13 aa)May be (48 aa)
R7May be (147 aa)NoMay be (72 aa)NoYesYesYesMay be (68 aa)May be (153 aa)May be (14 aa)May be (55 aa)May be (15 aa)May be (48 aa)May be (13 aa)May be (49 aa)
R14May be (149 aa)NoMay be (73 aa)NoYesYesYesMay be (68 aa)May be (155 aa)May be (14 aa)May be (56 aa)May be (15 aa)May be (49 aa)May be (13 aa)May be (49 aa)
R12May be (196 aa)May be (5 aa)NoMay be (14 aa)NoNoNoMay be (9 aa)May be (138 aa)NoMay be (168 aa)NoNoNoNo
R6May be (147 aa)NoMay be (69 aa)NoYesYesYesNoMay be (153 aa)NoMay be (55 aa)NoMay be (48 aa)NoMay be (48 aa)
R11May be (139 aa)May be (5 aa)NoMay be (14 aa)NoNoNoNoMay be (82 aa)NoMay be (112 aa)NoNoNoNo
R9May be (60 aa)NoMay be (68 aa)NoYesYesYesMay be (68 aa)May be (67 aa)May be (14 aa)NoMay be (15 aa)May be (48 aa)May be (13 aa)May be (48 aa)
R17May be (25 aa)NoMay be (33 aa)NoNoNoNoMay be (68 aa)May be (32 aa)May be (14 aa)NoMay be (15 aa)May be (22 aa)May be (13 aa)May be (35 aa)
R18May be (25 aa)NoMay be (33 aa)NoNoNoNoMay be (68 aa)May be (32 aa)May be (14 aa)NoMay be (15 aa)May be (22 aa)May be (13 aa)May be (35 aa)
R3May be (87 aa)NoNoNoNoNoNoMay be (8 aa)May be (86 aa)NoMay be (55 aa)NoNoNoNo
R16May be (87 aa)NoNoNoNoNoNoMay be (8 aa)May be (86 aa)NoMay be (55 aa)NoNoNoNo
R20NoNoNoNoNoNoNoMay be (66 aa)NoMay be (14 aa)NoMay be (15 aa)NoMay be (13 aa)No

Yes = perfect match between predicted protein sequence and antibody epitope.
May be = partial match between predicted protein sequence and antibody epitope; in parenthesis number of amino acid matching/total number of amino acid recognized by antibody epitope.
No = matching between predicted protein sequence and antibody epitope is less than 8 consecutive amino acids.