A Genome-Wide Identification of Genes Undergoing Recombination and Positive Selection in Neisseria

Table 3

Genes under positive selection.

Gene	Cluster ID	COG	Function		-value		Positively selected sites
dnaE	N35	L	DNA polymerase III alpha subunit	48.459	0.016	13.082	413, 968, 971, 972
	N139	P	Ammonium transporter	42.474	0.096	63.631	12, 14, 18, 19, 20, 21, 67
recB	N245	L	DNA helicase	67.811	0.000	4.287	4, 251, 865, 869, 882, 1036, 1137, 1184
hup	N352	P	TonB-dependent receptor	129.195	0.000	7.064	263, 265, 282, 287, 288, 290, 291, 293, 304, 378, 380, 535, 538, 553, 557, 561, 646, 810, 884, 889, 891
	N380	M	Hypothetical protein	46.418	0.029	152.674	18, 19, 20, 23, 24, 25, 26, 28, 30
dnaX	N436	L	DNA polymerase III gamma and tau subunit	57.997	0.001	6.032	228, 294, 329, 512, 559
uraA	N514	F	Uracil permease	55.222	0.002	16.737	2, 9, 10, 17, 24, 25, 29, 31, 395, 455
	N832	S	Hypothetical protein	51.544	0.006	6.580	190, 207, 212, 228, 232, 276, 314, 368, 401, 514, 729
frpB	N966	P	Iron-regulated outer membrane protein	125.098	0.000	4.333	341, 342, 343, 348, 394, 409, 415, 451, 459, 466, 467, 471, 472, 473, 476, 483, 674, 688, 718, 730, 739
polA	N973	L	DNA polymerase I	54.283	0.003	6.489	212, 866, 867, 881, 882, 898