Continental Monophyly and Molecular Divergence of Peninsular Malaysia’s Macaca fascicularis fascicularis

Table 6

Summary statistic of D-loop mtDNA sequence variations in seven populations of M. f. fascicularis.

Populations	𝑁	𝐻	𝑆	Hd^†	π ^†	𝐾	𝐷	Fs	𝐷^∗	𝐹^∗
Malaysia	33	18	45	0.9191 ± 0.032	0.01805 ± 0.00264	7.131	−1.30238	−3.422	−1.05396	−1.34515
Indonesia	17	16	44	0.993 ± 0.023	0.02915 ± 0.00271	11.515	−0.47866	−5.846	−0.62676	−0.67653
Mauritius	4	2	1	0.500 ± 0.265	0.00127 ± 0.00067	0.500	−0.61237	0.172	−0.61237	−0.47871
Philippines	9	4	8	0.750 ± 0.01257	0.00844 ± 0.00143	3.333	0.60112	1.546	0.13479	0.27529
Cambodian-Chinese	15	14	27	0.990 ± 0.028	0.02045 ± 0.00294	8.076	−0.11460	−6.054	−0.01858	−0.05199
Vietnam	15	14	40	0.990 ± 0.028	0.03043 ± 0.00436	12.019	−0.09810	−4.187	0.27234	0.19491
All populations	98	65	104	0.985 ± 0.005	0.05101 ± 0.00168	20.147	−0.00311	−22.794	−0.54873	−0.38190

N—number of sequences analyzed; H—number of haplotypes; S—number of segregating sites; Hd—haplotype diversity; π—nucleotide diversity; K—average number of nucleotide differences; D—Tajima’s statistic [45]; Fs—Fu’s statistic [47]; 𝐷^∗ and 𝐹^∗—Fu and Li’s statistics [46]. ^∗𝑃<0.10 (for 𝐷, 𝐷^∗ and 𝐹^∗). Significance was determined using coalescent simulations in DnaSP version 4.0 (Rozas et al. 2003) [38]. ^†Sites with gaps were completely excluded.