Research Article
An Association Rule Mining Approach to Discover lncRNAs Expression Patterns in Cancer Datasets
Table 2
LFC of the 13 lncRNAs in GEO datasets.
| lncRNA symbol | Gene ID | lncRNA name | GDS1962 | GDS3592 | Astrocytoma (grade II) | Astrocytoma (grade III) | Glioblastoma (grade IV) | Oligodendroglioma (grade II) | Oligodendroglioma (grade III) | Ovarian cancer epithelial cells |
| OIP5-AS1 | 729082 | OIP5 antisense RNA 1 | −1 | −1.3 | −1.5 | −1 | −1.5 | −1.3 | RFPL1S | 10740 | RFPL1 antisense RNA 1 | −2.5 | −2.6 | −3.8 | −2.3 | −3.3 | −2.5 | MEG3 | 55384 | Maternally expressed 3 | −2.4 | −2.8 | −2.7 | −2.6 | −2.7 | 1.2 | KRTAP5-AS1 | 338651 | KRTAP5-1/KRTAP5-2 antisense RNA 1 | −1.7 | −1.7 | −2 | −1.1 | −1.8 | 1 | LINC00301 | 283197 | Long intergenic non-protein coding RNA 301 | −2.2 | −1.5 | −1.9 | −1.4 | −2.1 | 1.9 | PART1 | 25859 | Prostate androgen-regulated transcript 1 | −1.4 | −1.7 | −2 |
−1.4 | −1.9 | 2.4 | PPP1R26-AS1 | 100506599 | PPP1R26 antisense RNA 1 | −1.4 | −1.4 | −1.2 | −1.1 | −1.4 | 1.9 | SYN2 | 6854 | Synapsin II | −2.6 | −2.6 | −4 | −2.5 | −3.8 | 2.2 | CRNDE | 643911 | Colorectal neoplasia differentially expressed | 3.2 | 3.6 | 4.2 | 1.8 | 3.7 | −4.3 | RUSC1-AS1 | 284618 | RUSC1 antisense RNA 1 | 1.6 | 1.5 | 1.2 | 1.4 | 1.5 | 2 | UBL7-AS1 | 440288 | UBL7 antisense RNA 1 | 1.8 | 1.6 | 1.5 | 1.4 | 1.8 | 1.6 | DLEU2 | 8847 | Deleted in lymphocytic leukemia 2 | 1 | 1 | 1.5 | 1 | 1.4 | 1.5 | UHRF1 | 29128 | Ubiquitin-like with PHD and ring finger domains 1 | 2.5 | 3.6 | 4 | 3.1 | 3.8 | 3.4 |
|
|