A Fast Cluster Motif Finding Algorithm for ChIP-Seq Data Sets

Table 1

An example of searching the emerging substrings of all possible -mers.

-mer	Number in test set	Number in control set	(, )	(, , )	= 0.02667; = 2
AACTGC	5	16	0.0083	0.3125	N
AAGTGG	8	6	0.0133	1.3333	N
CAGCGA	19	3	0.0317	6.3333	Y
TGACTT	15	7	0.025	2.1429	N
GCTTCA	2	5	0.0033	0.4	N