A Fast Cluster Motif Finding Algorithm for ChIP-Seq Data Sets

Table 3

The information of 12 mES ChIP-seq data sets.

TF	Peaks	Total size (Mb)	Running time (sec)
CTCF	39601	48.98	20570 s
cMYC	3422	4.23	360 s
Esrrb	21644	26.83	6101 s
Klf4	10872	13.45	1871 s
Nanog	10342	12.82	1489 s
nMyc	7181	8.88	1018 s
Oct4	3761	4.65	426 s
STAT3	2546	3.14	295 s
Smad1	1126	1.40	98 s
Sox2	4526	5.60	536 s
Tcfcp2l1	26907	33.59	11075 s
Zfx	10336	12.76	1310 s