Constructing a Genome-Wide LD Map of Wild A. gambiae Using Next-Generation Sequencing

Table 1

Correlation coefficient between nonsynonymous SNPs of two pairs of neighboring genes.

	Based on HT; (9 individuals)	Based on clone; (22 individuals)
AGAP006906 versus AGAP006914	0.156	0.009
AGAP006914 versus AGAP007031	0.156	0.02
AGAP007031 versus AGAP007032	0.044	<0.001

AGAP006906, SNP position (bp), 39852810; AGAP006914, SNP position, 39966795; AGAP007031, SNP position, 41165983; AGAP007032, SNP position, 41246582. HT: high-throughput sequencing data. Clone: PCR fragments from individual mosquitoes.