Gene ( ) RNA (TSS) dbSNP [4 ] SNP hg19→min 5′-flank hg19 min 3′-flank min versus hg19 , nM Known [reference] or hypothetical [this work] diseases [Reference], [this work] FSHR (3)#2 (+16) rs1394205 −29g→a gcaaatgcag g a aagaaatcag 7.3 versus 7.3 = 0 >0.05 No differences between proven fathers and infertile men [121 , 122 ] F9 (4)#1 (+1) ND, see [123 ] −48g→c agctcagctt g c tactttggta 6.4 versus 6.4 = 0 >0.05 Leiden hemophilia B, EMSA: HNF4-binding site disrupted rather than proximal TBP-binding site
[123 ] ND, see [123 ] −42t→a gcttgtactt t a ggtacaacta 6.4 versus 6.4 = 0 >0.05 rs371045754 −32a→c tggtacaact a c atcgacctta 9.6 versus 6.4 ↓ 5 10 (Hypothetically) Leiden hemophilia B [This work] StAR (3)#3 (+31) rs16887226 −33c→t cagccttcag c t gggggacatt 10.3 versus 10.3 = 0 >0.05 Hypertensive diabetic patients, EMSA: unknown TF-binding site disrupted rather than TBP-binding site [124 ] rs544850971 −22a→g tcagcggggg a g catttaagac 12.1 versus 10.3 ↓ 5 10 (Hypothetically) Congenital adrenal hyperplasia [This work], [125 ] GH1 (11)#1 (+1) rs28399433 del-50g aggggccagg g — tataaaaagg 1.4 versus 1.5 = 1 >0.05 Short stature, EMSA: unknown TF-binding site disrupted rather than TBP-binding site [126 ] GSTM3 (8)#4 (+1) rs1332018 −49c→a ccccttatgt c a gggtataaag 3.1 versus 3.6 = 1.9 >0.05 Risk of brain, lung, testicular, and renal cell carcinomas, LUC: “−49c ” is 10% of “−49a ” [127 , 128 ] rs200209906 −36c→t,a gtataaagcc c t,a ctcccgctca 4.3 versus 3.6 ↓ 2.4 <0.05 (Hypothetically) Risk of brain, lung, testicular, and renal cell carcinomas [This work] UGT1A7 (4)#1 (+1) rs7586110 −57t→g cttcttccac t g tactatatta 1.48 versus 1.54 = 1 >0.05 Oral cancer risk, LUC: “−57g ” is 50% of “−57t ” [129 ] rs574890114 −55a→g tcttccactt a g ctatattata 2.02 versus 1.54 ↓ 4 10 (Hypothetically) Higher risk of oral cancer
[This work] rs542729995 −52a→g tccacttact a g tattatagga 2.28 versus 1.54 ↓ 5 10 GJA5 (8)#1 (+1) rs10465885 −55g→a caactaagat g a tattaaacac 3.1 versus 3.4 = 1 >0.05 Arrhythmia, cardiovascular events LUC: “−55g ” is 50% of “−55a ” [130 ] #2 (+1) rs35594137 −39g→a gaggagggaa g a gcgacagata 5.7 versus 5.7 = 0 >0.05 Arrhythmia, cardiovascular events LUC: “−39a /76g” is 50% of “−39g/76a ” [131 ] rs587745372 −29a→t ggcgacagat a t cgattaaaaa 6.8 versus 5.7 ↓ 3 10 (Hypothetically) Arrhythmia, cardiovascular events [This work] THBD (3)#1 (+68) rs13306848 −33g→a agggagggcc g a ggcacttata 2.3 versus 2.1 = 1 10−7 Thrombophlebitis risk LUC: “−33a ” is 84% of “−33g ” [132 ] UGT1A1 (10)#201 (+1) rs34983651 ins-55at ggtttttgcc — at atatatatat 0.65 versus 0.67 = 1 >0.05 Necessary but not sufficient in hyperbilirubinemia and jaundice [133 ] rs398048306 del-51(at)1;2 ggtttttgcc at(at) — atatatatat 0.71 versus 0.67 = 1 >0.05 Ethnic differences such as rare alleles in humans [12 ]