Research Article

ProGeRF: Proteome and Genome Repeat Finder Utilizing a Fast Parallel Hash Function

Table 3

Repetitive protein elements found by the web tool ProGeRF.

ID sequence Locus Motif Rep.

XP_001352170.1 62–97 GASAQS 6
ACO49545.1 146–297 PNAN 38
AAN36363.1 693–712 KEKEE 4

The parameters used were motif size between 2 and 6, repetitions of the least 4 motifs, and zero for the gaps, overlap, and degeneration.