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BioMed Research International
Volume 2015 (2015), Article ID 475062, 6 pages
Resource Review

A Large-Scale Structural Classification of Antimicrobial Peptides

Department of Computer Science and Engineering, National Taiwan Ocean University, Keelung 202, Taiwan

Received 1 September 2014; Accepted 23 February 2015

Academic Editor: Oliver Ray

Copyright © 2015 Hao-Ting Lee et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Supplementary Material

The content of the Supplementary Material can be classified into three main categories: (1) an example of ADAM fold cluster, (2) the technical descriptions for aliphatic index**, instability index**, and hydropathicity**, and (3) the frequently asked questions about ADAM. In more detail, Table S1 lists ADAM fold cluster AC_001 with 26 AMP structures associated with 207 unique AMP sequences. Figure S1 and S2 illustrate how to browse through ADAM either from AMP sequence-structure or AMP structure-sequence. Figure S3 and S4 show the basis of the AMP prediction tools using support vector machines and hidden Markov models, which are provided in ADAM.

  1. Supplementary Material