Research Article
A Novel Loss-of-Sclerostin Function Mutation in a First Egyptian Family with Sclerosteosis
Table 2
Data of Mutation Taster (MT) tool about prediction of effect of c.87_88insC mutation.
| | Summary | □ NMD | | □ Amino acid sequence changed | | □ Frameshift | | □ Protein features (might be) affected | | □ Splice site changes |
| | Analysed issue | Analysis result |
| | Name of alteration (HGNC) | SOST | | Alteration (phys. location) | chr17: 41836022_41836023insG | | Alteration type/region | Insertion/CDS | | AA changes | | | Position(s) of altered AA | 30 (frameshift or PTC further changes downstream) | | Frameshift | Yes | | phyloP/phastCons | 2.271, 1 (flanking)/0.445, 1 (flanking) | | Length of protein | NMD | | Position (AA) of stop codon in wt/mu AA sequence | 214/32 | | Theoretical NMD boundary in CDS | 170 | | Wild type AA sequence | MQLPLALCLVCLLVHTAFRVVEGQGWQAFKNDATEIIPE LGEYPEPPPELENNKTMNRAENGGRPPHHPFETKDVSEY SCRELHFTRYVTDGPCRSAKPVTELVCSGQCGPARLLPN AIGRGKWWRPSGPDFRCIPDRYRAQRVQLLCPGGEAPRA RKVRLVASCKCKRLTRFHNQSELKDFGTEAARPQKGRK PRPRAR SAKANQAELE NA | | Mutated AA sequence | MQLPLALCLVCLLVHTAFRVVEGQGWQAFQ |
|
|
All positions are in base pairs (bp) if not explicitly stated differently. AA/aa: amino acid; CDS: coding sequence; mu: mutated; NMD: nonsense-mediated mRNA decay; nt: nucleotide; wt: wild type; TGP: 1000 Genomes Project.
|