Multi-Instance Multilabel Learning with Weak-Label for Predicting Protein Function in Electricigens

Table 6

Comparison results on two examples.

Organism/UniProt ID	Molecular function in UniProt	Methods	GO molecular function list
Geobacter sulfurreducens/; Q74BW7	(1) 4 iron, 4 sulfur cluster binding; (2) Dihydroxy-acid dehydratase activity; (3) Metal ion binding	Ground truth	GO:0008270	GO:0046872	GO:0000287
			GO:0051539	GO:0030145	GO:0005506
			GO:0004160
		MIMLwel	GO:0005524	GO:0008270	GO:0046872
			GO:0000287	GO:0030145	GO:0005506
		MIMLNN	Null
		MIMLRBF	GO:0000287	GO:0005506
		MIMLSVM	GO:0050567
		EnMIMLNN {metric}	GO:0000287	GO:0005506
Shewanella loihica PV-4/A3QFX5	(1) ATP binding; (2) Nucleoside-triphosphatase activity; (3) Zinc ion binding	Ground truth	GO:0003924	GO:0005524	GO:0004386
			GO:0008270	GO:0016887	GO:0046961
			GO:0005215	GO:0017111	GO:0004004
			GO:0008094	GO:0008565
		MIMLwel	GO:0005524	GO:0004386	GO:0016887
			GO:0046961	GO:0004004	GO:0008094
			GO:0043565
		MIMLNN	Null
		MIMLRBF	GO:0005524	GO:0004386	GO:0016887
			GO:0046961	GO:0004004	GO:0008094
		MIMLSVM	GO:0008270
		EnMIMLNN {metric}	GO:0005524	GO:0016887	GO:0004004