Research Article

In Silico Identification of Highly Conserved Epitopes of Influenza A H1N1, H2N2, H3N2, and H5N1 with Diagnostic and Vaccination Potential

Table 3

Consensus epitopes.

SubtypeProteinEpitopeSequenceT or B cellReference

H1N1HA1127SVSSFERFEIFPK136T[28]
2333VTGLRNIPSIQSRGL346T y B[29, 30]
NA396GWAIYSKDNNS106T[31]
4206LKYNGIITETIKSW219T[32]
M2529AASIIGILHLIL40T[33]
651ITRLFKHGLK60T[32]

H2N2HA7204LYQNVGTYVSVGTST218T[34]
8255FESTGNLIAPEYGFKIS271T[28]
9337IESRGLFGAIAGFIEGGWQ355T[35]

H3N2HA10113CYPYDVPDYASLRS126T y B[32, 36]
11324YVKQNTLKLA333T y B[37, 38]
NA12314SSYVCSGLVGDTPR327T[39]

H5N1HA13229IATRSKVNGQSGRM243T y B[32, 40]
NA14105SHLECRTFFLTQGALLNDKH124T y B[41, 42]
15234KIFKMEKGKVVKSVEL249T y B[32, 41]
NP16192ELIRMIKRGINDRNFWR208T[43]
17261RSALILRGSVAHKSCL276T[39]
18401ASAGQISVQPTFSVQRN417T[39]