Combined Analysis of SNP Array Data Identifies Novel CNV Candidates and Pathways in Ependymoma and Mesothelioma

Table 4

Comparison of SNP array data of ependymoma [13] analyzed by DNAcopy and CGHcall with amplifications.

DNAcopy		CGHcall		Kilday et al. [13]
Chromosome arm	Patients	Chromosome arm	Patients	Chromosome arm	Patients
1q	9	1q	15	1q	14
2q	7	2q	9	2q	11
2p	4	2p	10	2p	11
19p	4	19p	12	19p	10
5p	5	5p	9	5p	10
17q	4	17q	7	17q	5
18p	3	18p	12	18p	10
17p	2	17p	7	17p	5
19q	3	19q	10	19q	9
15q	4	15q	13	15q	8
6q	5	6q	10	6q	8
6p	5	6p	9	6p	8
12q	5	12q	8	12q	6
21q	5	21q	11	21q	6
22q	6	22q	12	22q	7
7q	4	7q	9	7q	7
7p	4	7p	8	7p	7
9p	5	9p	9	9p	7
9q	5	9q	9	9q	7
20p	4	20p	12	20p	6
20q	4	20q	13	20q	6
11q	5	11q	5	11q	7
12p	5	12p	8	12p	6
8p	4	8p	6	8p	6
8q	5	8q	6	8q	6
4p	4	4p	9	4p	6
4q	5	4q	9	4q	6
14q	6	14q	9	14q	8
13q	7	13q	7	13q	0
3q	6	3q	7	3q	0
3p	4	3p	7	3p	0
11p	0	11p	11	11p	7
5q	0	5q	10	5q	10
10q	6	10q	10	10q	0
10p	4	10p	9	10p	0
18q	4	18q	0	18q	10