A Practical and Scalable Tool to Find Overlaps between Sequences

Table 4

Time consumption (in seconds) for SOF and Readjoiner using 1, 4, and 16 threads (or the maximum number of threads for Readjoiner).

Data set	1 thread	4 threads	16 threads	1 thread	4 threads	16 threads
	SOF	SOF	SOF	RJ	RJ	RJ
Citrusclementina	48	15	6	31	22	19
Citrussinensis	82	23	8	62	45	42
Citrustrifoliata	33	9	3	10	7	6
C. elegans	56	16	12	61	34	28
Attacephalotes	48	44	44	5.7	2.7	2